Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB43Q86YS6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB43Q86YS6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB43Q86YS6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB43Q86YS6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RAB43Q86YS6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB43Q86YS6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB43Q86YS6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RAB43Q86YS6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB43Q86YS6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB43Q86YS6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RAB43Q86YS6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB43Q86YS6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB43Q86YS6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RAB43Q86YS6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.67■□□□□ 0.74
RAB43Q86YS6 AL512625.2-201ENST00000417533 625 ntBASIC19.67■□□□□ 0.74
RAB43Q86YS6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB43Q86YS6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.67■□□□□ 0.74
RAB43Q86YS6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RAB43Q86YS6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB43Q86YS6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RAB43Q86YS6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB43Q86YS6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RAB43Q86YS6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB43Q86YS6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB43Q86YS6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB43Q86YS6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB43Q86YS6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RAB43Q86YS6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB43Q86YS6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB43Q86YS6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB43Q86YS6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB43Q86YS6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB43Q86YS6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB43Q86YS6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB43Q86YS6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB43Q86YS6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB43Q86YS6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB43Q86YS6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.66■□□□□ 0.74
RAB43Q86YS6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB43Q86YS6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB43Q86YS6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RAB43Q86YS6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB43Q86YS6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB43Q86YS6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
RAB43Q86YS6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB43Q86YS6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB43Q86YS6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB43Q86YS6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB43Q86YS6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RAB43Q86YS6 MIPEPP3-201ENST00000412105 444 ntBASIC19.65■□□□□ 0.74
RAB43Q86YS6 AL162412.1-201ENST00000567129 965 ntBASIC19.65■□□□□ 0.74
RAB43Q86YS6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.65■□□□□ 0.74
RAB43Q86YS6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
RAB43Q86YS6 AL591742.1-201ENST00000604433 565 ntBASIC19.65■□□□□ 0.74
RAB43Q86YS6 AC016405.3-201ENST00000607710 860 ntBASIC19.65■□□□□ 0.74
RAB43Q86YS6 AC243732.1-201ENST00000612648 864 ntBASIC19.65■□□□□ 0.74
RAB43Q86YS6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.65■□□□□ 0.74
RAB43Q86YS6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB43Q86YS6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB43Q86YS6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB43Q86YS6 RBM17P2-201ENST00000616397 1405 ntBASIC19.65■□□□□ 0.74
RAB43Q86YS6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RAB43Q86YS6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RAB43Q86YS6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB43Q86YS6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB43Q86YS6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB43Q86YS6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB43Q86YS6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB43Q86YS6 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RAB43Q86YS6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB43Q86YS6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB43Q86YS6 TSPY20P-201ENST00000450910 630 ntBASIC19.64■□□□□ 0.73
RAB43Q86YS6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB43Q86YS6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB43Q86YS6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RAB43Q86YS6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RAB43Q86YS6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB43Q86YS6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB43Q86YS6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RAB43Q86YS6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RAB43Q86YS6 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RAB43Q86YS6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.64■□□□□ 0.73
RAB43Q86YS6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.64■□□□□ 0.73
RAB43Q86YS6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB43Q86YS6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB43Q86YS6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RAB43Q86YS6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RAB43Q86YS6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB43Q86YS6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RAB43Q86YS6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB43Q86YS6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB43Q86YS6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.63■□□□□ 0.73
RAB43Q86YS6 AC092053.2-201ENST00000640557 1818 ntBASIC19.63■□□□□ 0.73
RAB43Q86YS6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB43Q86YS6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
RAB43Q86YS6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB43Q86YS6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RAB43Q86YS6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.63■□□□□ 0.73
RAB43Q86YS6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms