Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC093787.1-201ENST00000450396 207 ntBASIC20.33■□□□□ 0.85
LRRTM4Q86VH4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.33■□□□□ 0.85
LRRTM4Q86VH4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRTM4Q86VH4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRTM4Q86VH4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRTM4Q86VH4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRTM4Q86VH4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRRTM4Q86VH4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
LRRTM4Q86VH4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
LRRTM4Q86VH4 MKRN4P-201ENST00000444706 1521 ntBASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.32■□□□□ 0.84
LRRTM4Q86VH4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
LRRTM4Q86VH4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LRRTM4Q86VH4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LRRTM4Q86VH4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRTM4Q86VH4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRTM4Q86VH4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.31■□□□□ 0.84
LRRTM4Q86VH4 FEM1AP4-201ENST00000443167 1987 ntBASIC20.31■□□□□ 0.84
LRRTM4Q86VH4 AL049796.1-201ENST00000565336 1766 ntBASIC20.31■□□□□ 0.84
LRRTM4Q86VH4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRRTM4Q86VH4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 AL355802.2-201ENST00000402069 882 ntBASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.3■□□□□ 0.84
LRRTM4Q86VH4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 AC010980.2-201ENST00000587099 1412 ntBASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRRTM4Q86VH4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRTM4Q86VH4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRTM4Q86VH4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.28■□□□□ 0.84
LRRTM4Q86VH4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRTM4Q86VH4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.28■□□□□ 0.84
LRRTM4Q86VH4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.28■□□□□ 0.84
LRRTM4Q86VH4 AC100791.3-201ENST00000617619 330 ntBASIC20.28■□□□□ 0.84
LRRTM4Q86VH4 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.28■□□□□ 0.84
LRRTM4Q86VH4 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.28■□□□□ 0.84
LRRTM4Q86VH4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRRTM4Q86VH4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRTM4Q86VH4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRRTM4Q86VH4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRTM4Q86VH4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms