Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LYSMD3Q7Z3D4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.77■□□□□ 0.92
LYSMD3Q7Z3D4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
LYSMD3Q7Z3D4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LYSMD3Q7Z3D4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.77■□□□□ 0.91
LYSMD3Q7Z3D4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.77■□□□□ 0.91
LYSMD3Q7Z3D4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 CDCA4P2-201ENST00000441182 718 ntBASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD3Q7Z3D4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.75■□□□□ 0.91
LYSMD3Q7Z3D4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 AC073130.3-201ENST00000624389 2278 ntBASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 RAP2CP1-201ENST00000605103 478 ntBASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 AC231657.2-201ENST00000624556 255 ntBASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD3Q7Z3D4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 AC007322.1-201ENST00000426983 750 ntBASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 AC007322.4-201ENST00000509611 723 ntBASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.73■□□□□ 0.91
LYSMD3Q7Z3D4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.72■□□□□ 0.91
LYSMD3Q7Z3D4 PKD1P6-201ENST00000343738 4769 ntBASIC20.72■□□□□ 0.91
LYSMD3Q7Z3D4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD3Q7Z3D4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD3Q7Z3D4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD3Q7Z3D4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD3Q7Z3D4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD3Q7Z3D4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD3Q7Z3D4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD3Q7Z3D4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LYSMD3Q7Z3D4 AC026185.1-201ENST00000445748 174 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms