Protein–RNA interactions for Protein: Q71SY5

MED25, Mediator of RNA polymerase II transcription subunit 25, humanhuman

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED25Q71SY5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.56■□□□□ 0.72
MED25Q71SY5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
MED25Q71SY5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MED25Q71SY5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MED25Q71SY5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
MED25Q71SY5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
MED25Q71SY5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
MED25Q71SY5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MED25Q71SY5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MED25Q71SY5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
MED25Q71SY5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
MED25Q71SY5 BX276092.2-201ENST00000417668 665 ntBASIC19.55■□□□□ 0.72
MED25Q71SY5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
MED25Q71SY5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.55■□□□□ 0.72
MED25Q71SY5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.55■□□□□ 0.72
MED25Q71SY5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.55■□□□□ 0.72
MED25Q71SY5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MED25Q71SY5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MED25Q71SY5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MED25Q71SY5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
MED25Q71SY5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.55■□□□□ 0.72
MED25Q71SY5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.55■□□□□ 0.72
MED25Q71SY5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.55■□□□□ 0.72
MED25Q71SY5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.55■□□□□ 0.72
MED25Q71SY5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
MED25Q71SY5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.55■□□□□ 0.72
MED25Q71SY5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.55■□□□□ 0.72
MED25Q71SY5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MED25Q71SY5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MED25Q71SY5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MED25Q71SY5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MED25Q71SY5 POU5F1P3-201ENST00000428824 1078 ntBASIC19.54■□□□□ 0.72
MED25Q71SY5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
MED25Q71SY5 RNA5SP413-201ENST00000516373 109 ntBASIC19.54■□□□□ 0.72
MED25Q71SY5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.54■□□□□ 0.72
MED25Q71SY5 AC066615.1-201ENST00000640911 628 ntBASIC19.54■□□□□ 0.72
MED25Q71SY5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
MED25Q71SY5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.54■□□□□ 0.72
MED25Q71SY5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MED25Q71SY5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
MED25Q71SY5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MED25Q71SY5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MED25Q71SY5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.54■□□□□ 0.72
MED25Q71SY5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
MED25Q71SY5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MED25Q71SY5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
MED25Q71SY5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MED25Q71SY5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.53■□□□□ 0.72
MED25Q71SY5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.53■□□□□ 0.72
MED25Q71SY5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MED25Q71SY5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MED25Q71SY5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MED25Q71SY5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
MED25Q71SY5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MED25Q71SY5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MED25Q71SY5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
MED25Q71SY5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MED25Q71SY5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.53■□□□□ 0.72
MED25Q71SY5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.53■□□□□ 0.72
MED25Q71SY5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
MED25Q71SY5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.53■□□□□ 0.72
MED25Q71SY5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.53■□□□□ 0.72
MED25Q71SY5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MED25Q71SY5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
MED25Q71SY5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MED25Q71SY5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MED25Q71SY5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.52■□□□□ 0.72
MED25Q71SY5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MED25Q71SY5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MED25Q71SY5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MED25Q71SY5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MED25Q71SY5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MED25Q71SY5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.52■□□□□ 0.72
MED25Q71SY5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.52■□□□□ 0.72
MED25Q71SY5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
MED25Q71SY5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MED25Q71SY5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
MED25Q71SY5 AC097658.1-201ENST00000475555 843 ntBASIC19.52■□□□□ 0.72
MED25Q71SY5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.52■□□□□ 0.72
MED25Q71SY5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MED25Q71SY5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
MED25Q71SY5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.51■□□□□ 0.71
MED25Q71SY5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MED25Q71SY5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MED25Q71SY5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MED25Q71SY5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MED25Q71SY5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MED25Q71SY5 RARRES2P4-201ENST00000514074 484 ntBASIC19.51■□□□□ 0.71
MED25Q71SY5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.51■□□□□ 0.71
MED25Q71SY5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.51■□□□□ 0.71
MED25Q71SY5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.51■□□□□ 0.71
MED25Q71SY5 FAM21FP-204ENST00000608637 956 ntBASIC19.51■□□□□ 0.71
MED25Q71SY5 ITM2C-210ENST00000620962 501 ntBASIC19.51■□□□□ 0.71
MED25Q71SY5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.51■□□□□ 0.71
MED25Q71SY5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MED25Q71SY5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MED25Q71SY5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MED25Q71SY5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
MED25Q71SY5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MED25Q71SY5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms