Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC149Q6ZUS6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCDC149Q6ZUS6 KRT17P3-201ENST00000420566 1262 ntBASIC21.79■■□□□ 1.08
CCDC149Q6ZUS6 RPPH1-201ENST00000516869 333 ntBASIC21.79■■□□□ 1.08
CCDC149Q6ZUS6 C1QBPP2-201ENST00000528754 825 ntBASIC21.79■■□□□ 1.08
CCDC149Q6ZUS6 PNMA6B-201ENST00000538162 1200 ntBASIC21.79■■□□□ 1.08
CCDC149Q6ZUS6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC149Q6ZUS6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC149Q6ZUS6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC149Q6ZUS6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC149Q6ZUS6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC149Q6ZUS6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC149Q6ZUS6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 AC116050.2-201ENST00000612102 1779 ntBASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 AC242852.2-201ENST00000615738 1807 ntBASIC21.78■■□□□ 1.08
CCDC149Q6ZUS6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 CYP21A1P-202ENST00000354927 1481 ntBASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 AC092368.3-202ENST00000574180 1591 ntBASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC149Q6ZUS6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC149Q6ZUS6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC149Q6ZUS6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC149Q6ZUS6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC149Q6ZUS6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC149Q6ZUS6 MIR4497-201ENST00000583208 89 ntBASIC21.76■■□□□ 1.07
CCDC149Q6ZUS6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC149Q6ZUS6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.75■■□□□ 1.07
CCDC149Q6ZUS6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 AC073912.3-201ENST00000624414 853 ntBASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CCDC149Q6ZUS6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms