Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.05■□□□□ 0.96
CASC4Q6P4E1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASC4Q6P4E1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.04■□□□□ 0.96
CASC4Q6P4E1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CASC4Q6P4E1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASC4Q6P4E1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASC4Q6P4E1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CASC4Q6P4E1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CASC4Q6P4E1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASC4Q6P4E1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CASC4Q6P4E1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASC4Q6P4E1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.04■□□□□ 0.96
CASC4Q6P4E1 AC005837.3-201ENST00000612163 286 ntBASIC21.04■□□□□ 0.96
CASC4Q6P4E1 AC061975.6-201ENST00000579045 1553 ntBASIC21.04■□□□□ 0.96
CASC4Q6P4E1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.04■□□□□ 0.96
CASC4Q6P4E1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CASC4Q6P4E1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CASC4Q6P4E1 AC092667.1-201ENST00000434301 2586 ntBASIC21.03■□□□□ 0.96
CASC4Q6P4E1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CASC4Q6P4E1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASC4Q6P4E1 AP004607.4-201ENST00000530158 1459 ntBASIC21.03■□□□□ 0.96
CASC4Q6P4E1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
CASC4Q6P4E1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CASC4Q6P4E1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CASC4Q6P4E1 AC079140.4-201ENST00000507448 529 ntBASIC21.03■□□□□ 0.96
CASC4Q6P4E1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CASC4Q6P4E1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CASC4Q6P4E1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CASC4Q6P4E1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.03■□□□□ 0.96
CASC4Q6P4E1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.03■□□□□ 0.96
CASC4Q6P4E1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 IRS3P-201ENST00000223076 1006 ntBASIC21.02■□□□□ 0.96
CASC4Q6P4E1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 AC105265.2-201ENST00000467189 838 ntBASIC21.02■□□□□ 0.96
CASC4Q6P4E1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CASC4Q6P4E1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
CASC4Q6P4E1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CASC4Q6P4E1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CASC4Q6P4E1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CASC4Q6P4E1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CASC4Q6P4E1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CASC4Q6P4E1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CASC4Q6P4E1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.01■□□□□ 0.95
CASC4Q6P4E1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CASC4Q6P4E1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CASC4Q6P4E1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CASC4Q6P4E1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CASC4Q6P4E1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CASC4Q6P4E1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CASC4Q6P4E1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21■□□□□ 0.95
CASC4Q6P4E1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CASC4Q6P4E1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CASC4Q6P4E1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CASC4Q6P4E1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CASC4Q6P4E1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CASC4Q6P4E1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21■□□□□ 0.95
CASC4Q6P4E1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21■□□□□ 0.95
CASC4Q6P4E1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21■□□□□ 0.95
CASC4Q6P4E1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
CASC4Q6P4E1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21■□□□□ 0.95
CASC4Q6P4E1 KRT87P-202ENST00000534226 1464 ntBASIC21■□□□□ 0.95
CASC4Q6P4E1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21■□□□□ 0.95
CASC4Q6P4E1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CASC4Q6P4E1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CASC4Q6P4E1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 AC008175.2-201ENST00000612840 297 ntBASIC20.99■□□□□ 0.95
CASC4Q6P4E1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CASC4Q6P4E1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms