Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 AC231657.2-201ENST00000624556 255 ntBASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HLA-DQA1Q5Y7H0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.27■□□□□ 0.68
HLA-DQA1Q5Y7H0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQA1Q5Y7H0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQA1Q5Y7H0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HLA-DQA1Q5Y7H0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQA1Q5Y7H0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQA1Q5Y7H0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQA1Q5Y7H0 AC007322.1-201ENST00000426983 750 ntBASIC19.27■□□□□ 0.68
HLA-DQA1Q5Y7H0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQA1Q5Y7H0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.27■□□□□ 0.68
HLA-DQA1Q5Y7H0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.27■□□□□ 0.68
HLA-DQA1Q5Y7H0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQA1Q5Y7H0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HLA-DQA1Q5Y7H0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HLA-DQA1Q5Y7H0 AL024507.2-201ENST00000606070 2574 ntBASIC19.27■□□□□ 0.67
HLA-DQA1Q5Y7H0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 DUX4L16-201ENST00000555130 1264 ntBASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 RARRES2P11-201ENST00000635158 484 ntBASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HLA-DQA1Q5Y7H0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 FEM1AP4-201ENST00000443167 1987 ntBASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HLA-DQA1Q5Y7H0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 AC073111.5-205ENST00000641717 521 ntBASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 AC026310.3-201ENST00000625186 2373 ntBASIC19.24■□□□□ 0.67
HLA-DQA1Q5Y7H0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HLA-DQA1Q5Y7H0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HLA-DQA1Q5Y7H0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HLA-DQA1Q5Y7H0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQA1Q5Y7H0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQA1Q5Y7H0 CDV3P1-201ENST00000471403 739 ntBASIC19.23■□□□□ 0.67
HLA-DQA1Q5Y7H0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DQA1Q5Y7H0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.23■□□□□ 0.67
HLA-DQA1Q5Y7H0 AL049796.1-201ENST00000565336 1766 ntBASIC19.23■□□□□ 0.67
HLA-DQA1Q5Y7H0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQA1Q5Y7H0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms