Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC31.63■■■□□ 2.65
CDC42BPAQ5VT25 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC31.63■■■□□ 2.65
CDC42BPAQ5VT25 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CDC42BPAQ5VT25 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CDC42BPAQ5VT25 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CDC42BPAQ5VT25 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC31.63■■■□□ 2.65
CDC42BPAQ5VT25 GXYLT1P3-201ENST00000453058 1193 ntBASIC31.63■■■□□ 2.65
CDC42BPAQ5VT25 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
CDC42BPAQ5VT25 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CDC42BPAQ5VT25 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
CDC42BPAQ5VT25 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CDC42BPAQ5VT25 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CDC42BPAQ5VT25 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC31.62■■■□□ 2.65
CDC42BPAQ5VT25 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDC42BPAQ5VT25 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC31.62■■■□□ 2.65
CDC42BPAQ5VT25 RPS20-210ENST00000523936 899 ntTSL 2 BASIC31.62■■■□□ 2.65
CDC42BPAQ5VT25 SPIB-206ENST00000596074 847 ntTSL 2 BASIC31.62■■■□□ 2.65
CDC42BPAQ5VT25 MTDHP1-201ENST00000605323 784 ntBASIC31.62■■■□□ 2.65
CDC42BPAQ5VT25 AL356652.1-201ENST00000615962 565 ntBASIC31.62■■■□□ 2.65
CDC42BPAQ5VT25 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
CDC42BPAQ5VT25 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 SERP1-205ENST00000487153 657 ntTSL 4 BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC31.61■■■□□ 2.65
CDC42BPAQ5VT25 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDC42BPAQ5VT25 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CDC42BPAQ5VT25 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CDC42BPAQ5VT25 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC31.6■■■□□ 2.65
CDC42BPAQ5VT25 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CDC42BPAQ5VT25 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDC42BPAQ5VT25 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
CDC42BPAQ5VT25 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDC42BPAQ5VT25 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
CDC42BPAQ5VT25 AC133681.1-201ENST00000465482 601 ntBASIC31.6■■■□□ 2.65
CDC42BPAQ5VT25 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDC42BPAQ5VT25 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
CDC42BPAQ5VT25 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC31.59■■■□□ 2.65
CDC42BPAQ5VT25 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC31.59■■■□□ 2.65
CDC42BPAQ5VT25 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDC42BPAQ5VT25 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC31.59■■■□□ 2.65
CDC42BPAQ5VT25 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC31.59■■■□□ 2.65
CDC42BPAQ5VT25 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDC42BPAQ5VT25 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CDC42BPAQ5VT25 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC31.59■■■□□ 2.65
CDC42BPAQ5VT25 LY6E-205ENST00000519611 635 ntTSL 3 BASIC31.59■■■□□ 2.65
CDC42BPAQ5VT25 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC31.59■■■□□ 2.65
CDC42BPAQ5VT25 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC31.59■■■□□ 2.65
CDC42BPAQ5VT25 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDC42BPAQ5VT25 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDC42BPAQ5VT25 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC31.57■■■□□ 2.65
CDC42BPAQ5VT25 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CDC42BPAQ5VT25 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
CDC42BPAQ5VT25 MOK-233ENST00000524214 1539 ntTSL 2 BASIC31.57■■■□□ 2.64
CDC42BPAQ5VT25 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CDC42BPAQ5VT25 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CDC42BPAQ5VT25 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CDC42BPAQ5VT25 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC31.57■■■□□ 2.64
CDC42BPAQ5VT25 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
CDC42BPAQ5VT25 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CDC42BPAQ5VT25 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CDC42BPAQ5VT25 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CDC42BPAQ5VT25 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC31.57■■■□□ 2.64
CDC42BPAQ5VT25 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
CDC42BPAQ5VT25 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CDC42BPAQ5VT25 C9orf163-202ENST00000624034 2573 ntBASIC31.56■■■□□ 2.64
CDC42BPAQ5VT25 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
CDC42BPAQ5VT25 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC31.56■■■□□ 2.64
CDC42BPAQ5VT25 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CDC42BPAQ5VT25 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CDC42BPAQ5VT25 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC31.55■■■□□ 2.64
CDC42BPAQ5VT25 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
CDC42BPAQ5VT25 ECEL1P3-201ENST00000427961 737 ntBASIC31.55■■■□□ 2.64
CDC42BPAQ5VT25 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC31.55■■■□□ 2.64
CDC42BPAQ5VT25 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC31.55■■■□□ 2.64
CDC42BPAQ5VT25 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms