Protein–RNA interactions for Protein: Q16385

SSX2, Protein SSX2, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2Q16385 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2Q16385 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2Q16385 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
SSX2Q16385 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2Q16385 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2Q16385 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.21■□□□□ 0.35
SSX2Q16385 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.21■□□□□ 0.35
SSX2Q16385 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.21■□□□□ 0.35
SSX2Q16385 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2Q16385 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SSX2Q16385 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.21■□□□□ 0.35
SSX2Q16385 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSX2Q16385 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
SSX2Q16385 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.21■□□□□ 0.34
SSX2Q16385 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SSX2Q16385 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SSX2Q16385 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 KRT19P1-201ENST00000405746 1186 ntBASIC17.2■□□□□ 0.34
SSX2Q16385 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SSX2Q16385 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.2■□□□□ 0.34
SSX2Q16385 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SSX2Q16385 AC003102.1-202ENST00000563394 1796 ntBASIC17.2■□□□□ 0.34
SSX2Q16385 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.2■□□□□ 0.34
SSX2Q16385 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSX2Q16385 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SSX2Q16385 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2Q16385 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SSX2Q16385 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2Q16385 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2Q16385 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2Q16385 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SSX2Q16385 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.19■□□□□ 0.34
SSX2Q16385 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.19■□□□□ 0.34
SSX2Q16385 AC022517.1-201ENST00000592429 346 ntBASIC17.19■□□□□ 0.34
SSX2Q16385 AC104187.1-201ENST00000607510 612 ntBASIC17.19■□□□□ 0.34
SSX2Q16385 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2Q16385 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2Q16385 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.19■□□□□ 0.34
SSX2Q16385 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2Q16385 AC010542.4-201ENST00000563151 1910 ntBASIC17.19■□□□□ 0.34
SSX2Q16385 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.19■□□□□ 0.34
SSX2Q16385 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2Q16385 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SSX2Q16385 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.19■□□□□ 0.34
SSX2Q16385 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SSX2Q16385 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.19■□□□□ 0.34
SSX2Q16385 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2Q16385 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2Q16385 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2Q16385 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2Q16385 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.18■□□□□ 0.34
SSX2Q16385 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2Q16385 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2Q16385 KRT18P61-201ENST00000585825 1298 ntBASIC17.18■□□□□ 0.34
SSX2Q16385 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2Q16385 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.18■□□□□ 0.34
SSX2Q16385 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SSX2Q16385 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
SSX2Q16385 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SSX2Q16385 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2Q16385 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2Q16385 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.18■□□□□ 0.34
SSX2Q16385 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2Q16385 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SSX2Q16385 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2Q16385 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2Q16385 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2Q16385 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SSX2Q16385 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
SSX2Q16385 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2Q16385 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2Q16385 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2Q16385 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2Q16385 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
SSX2Q16385 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2Q16385 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.17■□□□□ 0.34
SSX2Q16385 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2Q16385 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.17■□□□□ 0.34
SSX2Q16385 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.17■□□□□ 0.34
SSX2Q16385 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2Q16385 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2Q16385 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.17■□□□□ 0.34
SSX2Q16385 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.17■□□□□ 0.34
SSX2Q16385 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SSX2Q16385 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.17■□□□□ 0.34
SSX2Q16385 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SSX2Q16385 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms