Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HMGCS1Q01581 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 FP700111.2-201ENST00000619190 1892 ntBASIC19.9■□□□□ 0.78
HMGCS1Q01581 GABARAPL3-202ENST00000624044 1851 ntBASIC19.9■□□□□ 0.78
HMGCS1Q01581 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HMGCS1Q01581 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HMGCS1Q01581 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HMGCS1Q01581 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HMGCS1Q01581 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCS1Q01581 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCS1Q01581 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.89■□□□□ 0.77
HMGCS1Q01581 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCS1Q01581 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCS1Q01581 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCS1Q01581 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCS1Q01581 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCS1Q01581 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HMGCS1Q01581 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCS1Q01581 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCS1Q01581 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCS1Q01581 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCS1Q01581 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCS1Q01581 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.89■□□□□ 0.77
HMGCS1Q01581 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.89■□□□□ 0.77
HMGCS1Q01581 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.89■□□□□ 0.77
HMGCS1Q01581 AC138907.5-202ENST00000569484 235 ntBASIC19.89■□□□□ 0.77
HMGCS1Q01581 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HMGCS1Q01581 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
HMGCS1Q01581 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCS1Q01581 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCS1Q01581 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCS1Q01581 AC011484.1-201ENST00000377652 1995 ntBASIC19.88■□□□□ 0.77
HMGCS1Q01581 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
HMGCS1Q01581 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCS1Q01581 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCS1Q01581 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.88■□□□□ 0.77
HMGCS1Q01581 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.88■□□□□ 0.77
HMGCS1Q01581 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCS1Q01581 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.88■□□□□ 0.77
HMGCS1Q01581 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.88■□□□□ 0.77
HMGCS1Q01581 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.88■□□□□ 0.77
HMGCS1Q01581 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCS1Q01581 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.88■□□□□ 0.77
HMGCS1Q01581 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCS1Q01581 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.88■□□□□ 0.77
HMGCS1Q01581 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCS1Q01581 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HMGCS1Q01581 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HMGCS1Q01581 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.88■□□□□ 0.77
HMGCS1Q01581 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCS1Q01581 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.87■□□□□ 0.77
HMGCS1Q01581 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCS1Q01581 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCS1Q01581 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
HMGCS1Q01581 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCS1Q01581 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCS1Q01581 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCS1Q01581 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.87■□□□□ 0.77
HMGCS1Q01581 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.87■□□□□ 0.77
HMGCS1Q01581 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HMGCS1Q01581 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.87■□□□□ 0.77
HMGCS1Q01581 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HMGCS1Q01581 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCS1Q01581 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HMGCS1Q01581 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
HMGCS1Q01581 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCS1Q01581 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCS1Q01581 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HMGCS1Q01581 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.86■□□□□ 0.77
HMGCS1Q01581 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.86■□□□□ 0.77
HMGCS1Q01581 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS1Q01581 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS1Q01581 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS1Q01581 AL391422.3-201ENST00000603791 2761 ntBASIC19.86■□□□□ 0.77
HMGCS1Q01581 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.86■□□□□ 0.77
HMGCS1Q01581 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HMGCS1Q01581 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HMGCS1Q01581 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.86■□□□□ 0.77
HMGCS1Q01581 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.86■□□□□ 0.77
HMGCS1Q01581 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS1Q01581 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.86■□□□□ 0.77
HMGCS1Q01581 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS1Q01581 AC010141.2-201ENST00000452426 721 ntBASIC19.86■□□□□ 0.77
HMGCS1Q01581 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS1Q01581 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS1Q01581 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS1Q01581 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS1Q01581 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS1Q01581 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS1Q01581 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS1Q01581 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HMGCS1Q01581 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HMGCS1Q01581 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
HMGCS1Q01581 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HMGCS1Q01581 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.85■□□□□ 0.77
HMGCS1Q01581 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.85■□□□□ 0.77
HMGCS1Q01581 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
HMGCS1Q01581 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms