Protein–RNA interactions for Protein: P63173

RPL38, 60S ribosomal protein L38, humanhuman

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38P63173 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPL38P63173 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RPL38P63173 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.89■□□□□ 0.77
RPL38P63173 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RPL38P63173 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPL38P63173 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RPL38P63173 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPL38P63173 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.89■□□□□ 0.77
RPL38P63173 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.89■□□□□ 0.77
RPL38P63173 AC142381.2-201ENST00000566120 298 ntBASIC19.89■□□□□ 0.77
RPL38P63173 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RPL38P63173 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RPL38P63173 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.89■□□□□ 0.77
RPL38P63173 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RPL38P63173 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL38P63173 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL38P63173 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RPL38P63173 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RPL38P63173 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.88■□□□□ 0.77
RPL38P63173 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL38P63173 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL38P63173 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.88■□□□□ 0.77
RPL38P63173 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPL38P63173 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL38P63173 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
RPL38P63173 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPL38P63173 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.88■□□□□ 0.77
RPL38P63173 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.88■□□□□ 0.77
RPL38P63173 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.88■□□□□ 0.77
RPL38P63173 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPL38P63173 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
RPL38P63173 FP700111.2-201ENST00000619190 1892 ntBASIC19.88■□□□□ 0.77
RPL38P63173 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RPL38P63173 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
RPL38P63173 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPL38P63173 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
RPL38P63173 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RPL38P63173 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
RPL38P63173 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPL38P63173 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.87■□□□□ 0.77
RPL38P63173 AC079140.4-201ENST00000507448 529 ntBASIC19.87■□□□□ 0.77
RPL38P63173 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.87■□□□□ 0.77
RPL38P63173 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPL38P63173 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPL38P63173 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RPL38P63173 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.87■□□□□ 0.77
RPL38P63173 KRT87P-202ENST00000534226 1464 ntBASIC19.86■□□□□ 0.77
RPL38P63173 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
RPL38P63173 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.86■□□□□ 0.77
RPL38P63173 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
RPL38P63173 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.86■□□□□ 0.77
RPL38P63173 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RPL38P63173 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPL38P63173 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPL38P63173 AC008175.2-201ENST00000612840 297 ntBASIC19.86■□□□□ 0.77
RPL38P63173 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.86■□□□□ 0.77
RPL38P63173 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPL38P63173 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPL38P63173 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RPL38P63173 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RPL38P63173 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RPL38P63173 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPL38P63173 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.85■□□□□ 0.77
RPL38P63173 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.85■□□□□ 0.77
RPL38P63173 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPL38P63173 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
RPL38P63173 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.85■□□□□ 0.77
RPL38P63173 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPL38P63173 AL391422.3-201ENST00000603791 2761 ntBASIC19.84■□□□□ 0.77
RPL38P63173 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPL38P63173 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RPL38P63173 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RPL38P63173 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPL38P63173 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RPL38P63173 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.84■□□□□ 0.77
RPL38P63173 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
RPL38P63173 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.84■□□□□ 0.77
RPL38P63173 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.84■□□□□ 0.77
RPL38P63173 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.84■□□□□ 0.77
RPL38P63173 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPL38P63173 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPL38P63173 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
RPL38P63173 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
RPL38P63173 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPL38P63173 AC011484.1-201ENST00000377652 1995 ntBASIC19.84■□□□□ 0.77
RPL38P63173 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPL38P63173 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RPL38P63173 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPL38P63173 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPL38P63173 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
RPL38P63173 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPL38P63173 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPL38P63173 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPL38P63173 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
RPL38P63173 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPL38P63173 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPL38P63173 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPL38P63173 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPL38P63173 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPL38P63173 AC020907.5-201ENST00000624372 1936 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms