Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXCR4P61073 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CXCR4P61073 AC116562.4-201ENST00000641316 2276 ntBASIC18.83■□□□□ 0.6
CXCR4P61073 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CXCR4P61073 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCR4P61073 TCF3P1-201ENST00000423021 1937 ntBASIC18.82■□□□□ 0.6
CXCR4P61073 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXCR4P61073 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.82■□□□□ 0.6
CXCR4P61073 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CXCR4P61073 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.82■□□□□ 0.6
CXCR4P61073 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCR4P61073 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CXCR4P61073 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CXCR4P61073 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCR4P61073 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.82■□□□□ 0.6
CXCR4P61073 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXCR4P61073 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCR4P61073 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCR4P61073 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXCR4P61073 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXCR4P61073 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.82■□□□□ 0.6
CXCR4P61073 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.82■□□□□ 0.6
CXCR4P61073 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCR4P61073 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CXCR4P61073 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCR4P61073 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CXCR4P61073 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CXCR4P61073 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCR4P61073 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCR4P61073 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCR4P61073 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCR4P61073 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.81■□□□□ 0.6
CXCR4P61073 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CXCR4P61073 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCR4P61073 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCR4P61073 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.81■□□□□ 0.6
CXCR4P61073 AL512631.2-201ENST00000604634 923 ntBASIC18.81■□□□□ 0.6
CXCR4P61073 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCR4P61073 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCR4P61073 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCR4P61073 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CXCR4P61073 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.81■□□□□ 0.6
CXCR4P61073 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCR4P61073 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCR4P61073 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CXCR4P61073 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CXCR4P61073 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
CXCR4P61073 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CXCR4P61073 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCR4P61073 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCR4P61073 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCR4P61073 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.8■□□□□ 0.6
CXCR4P61073 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.8■□□□□ 0.6
CXCR4P61073 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CXCR4P61073 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.8■□□□□ 0.6
CXCR4P61073 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.8■□□□□ 0.6
CXCR4P61073 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
CXCR4P61073 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CXCR4P61073 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCR4P61073 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCR4P61073 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CXCR4P61073 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCR4P61073 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CXCR4P61073 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCR4P61073 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCR4P61073 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCR4P61073 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.79■□□□□ 0.6
CXCR4P61073 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.79■□□□□ 0.6
CXCR4P61073 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CXCR4P61073 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.79■□□□□ 0.6
CXCR4P61073 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCR4P61073 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCR4P61073 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.79■□□□□ 0.6
CXCR4P61073 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCR4P61073 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.79■□□□□ 0.6
CXCR4P61073 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCR4P61073 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CXCR4P61073 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CXCR4P61073 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCR4P61073 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCR4P61073 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCR4P61073 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCR4P61073 SYT6-210ENST00000641643 1587 ntBASIC18.78■□□□□ 0.6
CXCR4P61073 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCR4P61073 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCR4P61073 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCR4P61073 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.78■□□□□ 0.6
CXCR4P61073 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CXCR4P61073 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.78■□□□□ 0.6
CXCR4P61073 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCR4P61073 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCR4P61073 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.78■□□□□ 0.6
CXCR4P61073 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCR4P61073 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCR4P61073 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCR4P61073 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCR4P61073 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.77■□□□□ 0.6
CXCR4P61073 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCR4P61073 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CXCR4P61073 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms