Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS3P61009 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SPCS3P61009 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS3P61009 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS3P61009 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.75■□□□□ 0.27
SPCS3P61009 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SPCS3P61009 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS3P61009 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.75■□□□□ 0.27
SPCS3P61009 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.75■□□□□ 0.27
SPCS3P61009 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SPCS3P61009 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.75■□□□□ 0.27
SPCS3P61009 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS3P61009 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS3P61009 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.75■□□□□ 0.27
SPCS3P61009 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SPCS3P61009 AL356441.2-201ENST00000443009 864 ntBASIC16.75■□□□□ 0.27
SPCS3P61009 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.75■□□□□ 0.27
SPCS3P61009 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.75■□□□□ 0.27
SPCS3P61009 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.75■□□□□ 0.27
SPCS3P61009 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SPCS3P61009 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS3P61009 AC073314.1-201ENST00000568729 2216 ntBASIC16.75■□□□□ 0.27
SPCS3P61009 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.75■□□□□ 0.27
SPCS3P61009 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS3P61009 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS3P61009 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS3P61009 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS3P61009 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS3P61009 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SPCS3P61009 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS3P61009 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS3P61009 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS3P61009 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SPCS3P61009 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS3P61009 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SPCS3P61009 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS3P61009 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SPCS3P61009 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
SPCS3P61009 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.74■□□□□ 0.27
SPCS3P61009 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS3P61009 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SPCS3P61009 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.74■□□□□ 0.27
SPCS3P61009 BX842568.3-201ENST00000418104 571 ntBASIC16.74■□□□□ 0.27
SPCS3P61009 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.74■□□□□ 0.27
SPCS3P61009 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS3P61009 AC133561.4-201ENST00000566112 224 ntBASIC16.74■□□□□ 0.27
SPCS3P61009 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS3P61009 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS3P61009 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.74■□□□□ 0.27
SPCS3P61009 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SPCS3P61009 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.74■□□□□ 0.27
SPCS3P61009 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SPCS3P61009 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SPCS3P61009 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SPCS3P61009 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SPCS3P61009 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SPCS3P61009 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
SPCS3P61009 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.73■□□□□ 0.27
SPCS3P61009 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.73■□□□□ 0.27
SPCS3P61009 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SPCS3P61009 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.73■□□□□ 0.27
SPCS3P61009 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.73■□□□□ 0.27
SPCS3P61009 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SPCS3P61009 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SPCS3P61009 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.73■□□□□ 0.27
SPCS3P61009 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPCS3P61009 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SPCS3P61009 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPCS3P61009 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPCS3P61009 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SPCS3P61009 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SPCS3P61009 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SPCS3P61009 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
SPCS3P61009 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.72■□□□□ 0.27
SPCS3P61009 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
SPCS3P61009 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SPCS3P61009 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.72■□□□□ 0.27
SPCS3P61009 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.72■□□□□ 0.27
SPCS3P61009 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.72■□□□□ 0.27
SPCS3P61009 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.72■□□□□ 0.27
SPCS3P61009 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.72■□□□□ 0.27
SPCS3P61009 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SPCS3P61009 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SPCS3P61009 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.71■□□□□ 0.27
SPCS3P61009 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 262.2 ms