Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH15P55291 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDH15P55291 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH15P55291 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH15P55291 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH15P55291 AL512408.1-201ENST00000569378 2000 ntBASIC19.22■□□□□ 0.67
CDH15P55291 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH15P55291 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH15P55291 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH15P55291 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH15P55291 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
CDH15P55291 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH15P55291 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH15P55291 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH15P55291 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
CDH15P55291 AC026471.1-201ENST00000564629 3026 ntBASIC19.22■□□□□ 0.67
CDH15P55291 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH15P55291 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CDH15P55291 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH15P55291 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH15P55291 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH15P55291 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH15P55291 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.21■□□□□ 0.67
CDH15P55291 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CDH15P55291 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH15P55291 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.21■□□□□ 0.67
CDH15P55291 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDH15P55291 AC004408.2-201ENST00000623613 2777 ntBASIC19.21■□□□□ 0.67
CDH15P55291 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH15P55291 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.21■□□□□ 0.67
CDH15P55291 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH15P55291 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH15P55291 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CDH15P55291 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDH15P55291 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDH15P55291 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDH15P55291 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.2■□□□□ 0.66
CDH15P55291 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 AP000974.1-201ENST00000623909 2387 ntBASIC19.2■□□□□ 0.66
CDH15P55291 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.2■□□□□ 0.66
CDH15P55291 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDH15P55291 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH15P55291 AC099778.1-201ENST00000568593 1911 ntBASIC19.19■□□□□ 0.66
CDH15P55291 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH15P55291 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH15P55291 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 AL162377.1-201ENST00000618844 1793 ntBASIC19.19■□□□□ 0.66
CDH15P55291 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.19■□□□□ 0.66
CDH15P55291 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH15P55291 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH15P55291 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.19■□□□□ 0.66
CDH15P55291 AC079089.2-201ENST00000531211 1277 ntBASIC19.19■□□□□ 0.66
CDH15P55291 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.19■□□□□ 0.66
CDH15P55291 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
CDH15P55291 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
CDH15P55291 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDH15P55291 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDH15P55291 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH15P55291 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH15P55291 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH15P55291 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH15P55291 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH15P55291 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH15P55291 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.18■□□□□ 0.66
CDH15P55291 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDH15P55291 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.18■□□□□ 0.66
CDH15P55291 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CDH15P55291 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDH15P55291 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.18■□□□□ 0.66
CDH15P55291 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.17■□□□□ 0.66
CDH15P55291 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH15P55291 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDH15P55291 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms