Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
UBE2AP49459 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2AP49459 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC13.09□□□□□ -0.31
UBE2AP49459 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2AP49459 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC13.09□□□□□ -0.31
UBE2AP49459 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
UBE2AP49459 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2AP49459 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UBE2AP49459 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2AP49459 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2AP49459 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
UBE2AP49459 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC13.08□□□□□ -0.31
UBE2AP49459 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2AP49459 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC13.08□□□□□ -0.32
UBE2AP49459 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2AP49459 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC13.08□□□□□ -0.32
UBE2AP49459 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2AP49459 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2AP49459 AC003102.1-202ENST00000563394 1796 ntBASIC13.08□□□□□ -0.32
UBE2AP49459 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2AP49459 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2AP49459 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.08□□□□□ -0.32
UBE2AP49459 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.08□□□□□ -0.32
UBE2AP49459 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC13.08□□□□□ -0.32
UBE2AP49459 AC133561.4-201ENST00000566112 224 ntBASIC13.08□□□□□ -0.32
UBE2AP49459 AC142381.2-201ENST00000566120 298 ntBASIC13.08□□□□□ -0.32
UBE2AP49459 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
UBE2AP49459 AL139246.5-201ENST00000606645 996 ntBASIC13.08□□□□□ -0.32
UBE2AP49459 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
UBE2AP49459 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2AP49459 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2AP49459 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
UBE2AP49459 CROCCP1-201ENST00000426910 5675 ntBASIC13.08□□□□□ -0.32
UBE2AP49459 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2AP49459 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC13.08□□□□□ -0.32
UBE2AP49459 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC13.08□□□□□ -0.32
UBE2AP49459 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2AP49459 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2AP49459 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2AP49459 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.07□□□□□ -0.32
UBE2AP49459 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
UBE2AP49459 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
UBE2AP49459 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2AP49459 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2AP49459 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2AP49459 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2AP49459 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC13.07□□□□□ -0.32
UBE2AP49459 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2AP49459 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2AP49459 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2AP49459 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2AP49459 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2AP49459 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2AP49459 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBE2AP49459 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBE2AP49459 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC13.06□□□□□ -0.32
UBE2AP49459 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBE2AP49459 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC13.06□□□□□ -0.32
UBE2AP49459 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBE2AP49459 AC005229.4-201ENST00000610085 2198 ntBASIC13.06□□□□□ -0.32
UBE2AP49459 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBE2AP49459 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
UBE2AP49459 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBE2AP49459 MIR572-201ENST00000384983 95 ntBASIC13.06□□□□□ -0.32
UBE2AP49459 MIR939-201ENST00000401314 82 ntBASIC13.06□□□□□ -0.32
UBE2AP49459 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC13.06□□□□□ -0.32
UBE2AP49459 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC13.06□□□□□ -0.32
UBE2AP49459 BX005040.4-201ENST00000637145 1518 ntBASIC13.06□□□□□ -0.32
UBE2AP49459 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBE2AP49459 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.06□□□□□ -0.32
UBE2AP49459 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.06□□□□□ -0.32
UBE2AP49459 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBE2AP49459 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC13.06□□□□□ -0.32
UBE2AP49459 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBE2AP49459 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
UBE2AP49459 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
UBE2AP49459 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
UBE2AP49459 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
UBE2AP49459 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBE2AP49459 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBE2AP49459 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBE2AP49459 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBE2AP49459 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.05□□□□□ -0.32
UBE2AP49459 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBE2AP49459 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBE2AP49459 OR6D1P-202ENST00000641007 5290 ntBASIC13.05□□□□□ -0.32
UBE2AP49459 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBE2AP49459 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
UBE2AP49459 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBE2AP49459 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.05□□□□□ -0.32
UBE2AP49459 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
UBE2AP49459 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.05□□□□□ -0.32
UBE2AP49459 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.05□□□□□ -0.32
UBE2AP49459 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBE2AP49459 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
UBE2AP49459 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBE2AP49459 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBE2AP49459 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBE2AP49459 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
UBE2AP49459 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms