Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 AC013268.1-206ENST00000638368 961 ntBASIC16.86■□□□□ 0.29
CEACAM3P40198 AC112229.1-201ENST00000639295 961 ntBASIC16.86■□□□□ 0.29
CEACAM3P40198 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.86■□□□□ 0.29
CEACAM3P40198 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.86■□□□□ 0.29
CEACAM3P40198 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.86■□□□□ 0.29
CEACAM3P40198 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CEACAM3P40198 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CEACAM3P40198 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CEACAM3P40198 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CEACAM3P40198 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CEACAM3P40198 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
CEACAM3P40198 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.85■□□□□ 0.29
CEACAM3P40198 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.85■□□□□ 0.29
CEACAM3P40198 AC011767.1-201ENST00000617410 1153 ntBASIC16.85■□□□□ 0.29
CEACAM3P40198 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.85■□□□□ 0.29
CEACAM3P40198 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 RBM17P2-201ENST00000616397 1405 ntBASIC16.85■□□□□ 0.29
CEACAM3P40198 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CEACAM3P40198 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CEACAM3P40198 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM3P40198 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM3P40198 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM3P40198 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.84■□□□□ 0.29
CEACAM3P40198 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.84■□□□□ 0.29
CEACAM3P40198 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM3P40198 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM3P40198 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM3P40198 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.84■□□□□ 0.29
CEACAM3P40198 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.84■□□□□ 0.29
CEACAM3P40198 TERF1P5-201ENST00000477545 1207 ntBASIC16.84■□□□□ 0.29
CEACAM3P40198 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.84■□□□□ 0.29
CEACAM3P40198 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.84■□□□□ 0.29
CEACAM3P40198 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.84■□□□□ 0.29
CEACAM3P40198 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.84■□□□□ 0.29
CEACAM3P40198 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM3P40198 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.84■□□□□ 0.29
CEACAM3P40198 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM3P40198 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM3P40198 AL049796.1-201ENST00000565336 1766 ntBASIC16.84■□□□□ 0.29
CEACAM3P40198 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM3P40198 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.84■□□□□ 0.29
CEACAM3P40198 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM3P40198 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CEACAM3P40198 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM3P40198 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CEACAM3P40198 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM3P40198 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM3P40198 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.83■□□□□ 0.28
CEACAM3P40198 FEM1AP4-201ENST00000443167 1987 ntBASIC16.83■□□□□ 0.28
CEACAM3P40198 CDV3P1-201ENST00000471403 739 ntBASIC16.83■□□□□ 0.28
CEACAM3P40198 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.83■□□□□ 0.28
CEACAM3P40198 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM3P40198 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.83■□□□□ 0.28
CEACAM3P40198 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CEACAM3P40198 MFSD11-216ENST00000590393 1141 ntBASIC16.83■□□□□ 0.28
CEACAM3P40198 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM3P40198 AC092666.2-201ENST00000613287 246 ntBASIC16.83■□□□□ 0.28
CEACAM3P40198 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.83■□□□□ 0.28
CEACAM3P40198 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CEACAM3P40198 AC231657.2-201ENST00000624556 255 ntBASIC16.83■□□□□ 0.28
CEACAM3P40198 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CEACAM3P40198 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.83■□□□□ 0.28
CEACAM3P40198 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM3P40198 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM3P40198 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CEACAM3P40198 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CEACAM3P40198 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CEACAM3P40198 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CEACAM3P40198 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.82■□□□□ 0.28
CEACAM3P40198 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CEACAM3P40198 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CEACAM3P40198 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CEACAM3P40198 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.82■□□□□ 0.28
CEACAM3P40198 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CEACAM3P40198 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CEACAM3P40198 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CEACAM3P40198 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CEACAM3P40198 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CEACAM3P40198 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CEACAM3P40198 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CEACAM3P40198 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CEACAM3P40198 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CEACAM3P40198 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CEACAM3P40198 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms