Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFSF4P23510 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFSF4P23510 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.68■□□□□ 0.42
TNFSF4P23510 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFSF4P23510 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF4P23510 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF4P23510 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFSF4P23510 DUX4L16-201ENST00000555130 1264 ntBASIC17.68■□□□□ 0.42
TNFSF4P23510 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFSF4P23510 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TNFSF4P23510 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFSF4P23510 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF4P23510 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
TNFSF4P23510 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFSF4P23510 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF4P23510 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TNFSF4P23510 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TNFSF4P23510 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF4P23510 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF4P23510 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFSF4P23510 CDV3P1-201ENST00000471403 739 ntBASIC17.67■□□□□ 0.42
TNFSF4P23510 AC007322.4-201ENST00000509611 723 ntBASIC17.67■□□□□ 0.42
TNFSF4P23510 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFSF4P23510 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF4P23510 RARRES2P11-201ENST00000635158 484 ntBASIC17.67■□□□□ 0.42
TNFSF4P23510 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF4P23510 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
TNFSF4P23510 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TNFSF4P23510 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF4P23510 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFSF4P23510 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF4P23510 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF4P23510 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF4P23510 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TNFSF4P23510 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF4P23510 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.66■□□□□ 0.42
TNFSF4P23510 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFSF4P23510 AL591742.1-201ENST00000604433 565 ntBASIC17.66■□□□□ 0.42
TNFSF4P23510 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TNFSF4P23510 AC008694.1-202ENST00000636953 945 ntBASIC17.66■□□□□ 0.42
TNFSF4P23510 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF4P23510 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF4P23510 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TNFSF4P23510 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF4P23510 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.66■□□□□ 0.42
TNFSF4P23510 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF4P23510 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF4P23510 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.66■□□□□ 0.42
TNFSF4P23510 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF4P23510 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF4P23510 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TNFSF4P23510 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFSF4P23510 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFSF4P23510 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFSF4P23510 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TNFSF4P23510 AC006970.2-201ENST00000450065 779 ntBASIC17.65■□□□□ 0.42
TNFSF4P23510 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFSF4P23510 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFSF4P23510 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF4P23510 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFSF4P23510 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF4P23510 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF4P23510 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF4P23510 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF4P23510 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TNFSF4P23510 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
TNFSF4P23510 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TNFSF4P23510 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.64■□□□□ 0.41
TNFSF4P23510 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TNFSF4P23510 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
TNFSF4P23510 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF4P23510 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF4P23510 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF4P23510 CDCA4P2-201ENST00000441182 718 ntBASIC17.64■□□□□ 0.41
TNFSF4P23510 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.64■□□□□ 0.41
TNFSF4P23510 AC069236.1-201ENST00000604339 616 ntBASIC17.64■□□□□ 0.41
TNFSF4P23510 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF4P23510 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF4P23510 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF4P23510 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.64■□□□□ 0.41
TNFSF4P23510 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF4P23510 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF4P23510 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF4P23510 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.64■□□□□ 0.41
TNFSF4P23510 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFSF4P23510 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF4P23510 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF4P23510 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TNFSF4P23510 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF4P23510 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF4P23510 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF4P23510 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF4P23510 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TNFSF4P23510 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF4P23510 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF4P23510 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TNFSF4P23510 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF4P23510 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF4P23510 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF4P23510 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms