Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.79■■□□□ 1.08
MMP8P22894 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.79■■□□□ 1.08
MMP8P22894 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.79■■□□□ 1.08
MMP8P22894 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
MMP8P22894 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MMP8P22894 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.79■■□□□ 1.08
MMP8P22894 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MMP8P22894 AC116050.2-201ENST00000612102 1779 ntBASIC21.79■■□□□ 1.08
MMP8P22894 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.78■■□□□ 1.08
MMP8P22894 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MMP8P22894 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MMP8P22894 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MMP8P22894 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
MMP8P22894 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MMP8P22894 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MMP8P22894 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
MMP8P22894 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MMP8P22894 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.78■■□□□ 1.08
MMP8P22894 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.78■■□□□ 1.08
MMP8P22894 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
MMP8P22894 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.78■■□□□ 1.08
MMP8P22894 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MMP8P22894 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MMP8P22894 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MMP8P22894 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MMP8P22894 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.77■■□□□ 1.08
MMP8P22894 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MMP8P22894 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
MMP8P22894 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
MMP8P22894 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MMP8P22894 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.77■■□□□ 1.08
MMP8P22894 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.77■■□□□ 1.08
MMP8P22894 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.77■■□□□ 1.08
MMP8P22894 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MMP8P22894 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MMP8P22894 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.77■■□□□ 1.08
MMP8P22894 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.77■■□□□ 1.08
MMP8P22894 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
MMP8P22894 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MMP8P22894 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MMP8P22894 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MMP8P22894 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MMP8P22894 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.76■■□□□ 1.07
MMP8P22894 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
MMP8P22894 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
MMP8P22894 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.76■■□□□ 1.07
MMP8P22894 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
MMP8P22894 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.76■■□□□ 1.07
MMP8P22894 MIR5787-201ENST00000611784 55 ntBASIC21.76■■□□□ 1.07
MMP8P22894 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.76■■□□□ 1.07
MMP8P22894 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MMP8P22894 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MMP8P22894 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
MMP8P22894 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.76■■□□□ 1.07
MMP8P22894 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MMP8P22894 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MMP8P22894 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.75■■□□□ 1.07
MMP8P22894 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.75■■□□□ 1.07
MMP8P22894 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MMP8P22894 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.75■■□□□ 1.07
MMP8P22894 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.75■■□□□ 1.07
MMP8P22894 AC027702.1-201ENST00000563810 1770 ntBASIC21.75■■□□□ 1.07
MMP8P22894 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MMP8P22894 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MMP8P22894 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.75■■□□□ 1.07
MMP8P22894 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MMP8P22894 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.75■■□□□ 1.07
MMP8P22894 AL162430.1-201ENST00000480705 870 ntBASIC21.75■■□□□ 1.07
MMP8P22894 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.75■■□□□ 1.07
MMP8P22894 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.75■■□□□ 1.07
MMP8P22894 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.75■■□□□ 1.07
MMP8P22894 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
MMP8P22894 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MMP8P22894 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.75■■□□□ 1.07
MMP8P22894 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MMP8P22894 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.75■■□□□ 1.07
MMP8P22894 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
MMP8P22894 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.75■■□□□ 1.07
MMP8P22894 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.75■■□□□ 1.07
MMP8P22894 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
MMP8P22894 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MMP8P22894 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
MMP8P22894 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MMP8P22894 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.74■■□□□ 1.07
MMP8P22894 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.74■■□□□ 1.07
MMP8P22894 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.74■■□□□ 1.07
MMP8P22894 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
MMP8P22894 KRT18P11-201ENST00000435214 1283 ntBASIC21.74■■□□□ 1.07
MMP8P22894 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MMP8P22894 AC137761.2-201ENST00000561729 223 ntBASIC21.74■■□□□ 1.07
MMP8P22894 AC145350.3-201ENST00000569033 163 ntBASIC21.74■■□□□ 1.07
MMP8P22894 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MMP8P22894 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MMP8P22894 AC010536.3-201ENST00000620306 533 ntBASIC21.74■■□□□ 1.07
MMP8P22894 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
MMP8P22894 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.74■■□□□ 1.07
MMP8P22894 FP700111.2-201ENST00000619190 1892 ntBASIC21.74■■□□□ 1.07
MMP8P22894 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.74■■□□□ 1.07
MMP8P22894 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MMP8P22894 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms