Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRM3P20309 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRM3P20309 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.54■□□□□ 0.88
CHRM3P20309 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CHRM3P20309 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRM3P20309 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRM3P20309 NTF6G-201ENST00000591094 616 ntBASIC20.54■□□□□ 0.88
CHRM3P20309 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRM3P20309 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRM3P20309 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRM3P20309 PLK5-205ENST00000642079 1969 ntBASIC20.54■□□□□ 0.88
CHRM3P20309 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRM3P20309 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHRM3P20309 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHRM3P20309 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
CHRM3P20309 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRM3P20309 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRM3P20309 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CHRM3P20309 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CHRM3P20309 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRM3P20309 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRM3P20309 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRM3P20309 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRM3P20309 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRM3P20309 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRM3P20309 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CHRM3P20309 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRM3P20309 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRM3P20309 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.52■□□□□ 0.88
CHRM3P20309 KRT18P20-201ENST00000548986 1279 ntBASIC20.52■□□□□ 0.88
CHRM3P20309 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.52■□□□□ 0.88
CHRM3P20309 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRM3P20309 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRM3P20309 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRM3P20309 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CHRM3P20309 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CHRM3P20309 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHRM3P20309 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CHRM3P20309 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHRM3P20309 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRM3P20309 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.51■□□□□ 0.87
CHRM3P20309 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRM3P20309 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRM3P20309 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRM3P20309 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRM3P20309 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.51■□□□□ 0.87
CHRM3P20309 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CHRM3P20309 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRM3P20309 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.51■□□□□ 0.87
CHRM3P20309 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.51■□□□□ 0.87
CHRM3P20309 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.51■□□□□ 0.87
CHRM3P20309 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRM3P20309 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.51■□□□□ 0.87
CHRM3P20309 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.51■□□□□ 0.87
CHRM3P20309 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRM3P20309 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRM3P20309 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
CHRM3P20309 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHRM3P20309 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRM3P20309 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHRM3P20309 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CHRM3P20309 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHRM3P20309 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.5■□□□□ 0.87
CHRM3P20309 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CHRM3P20309 AC245052.3-201ENST00000450182 901 ntBASIC20.5■□□□□ 0.87
CHRM3P20309 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.5■□□□□ 0.87
CHRM3P20309 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRM3P20309 KRT18P61-201ENST00000585825 1298 ntBASIC20.5■□□□□ 0.87
CHRM3P20309 AC006128.1-201ENST00000624704 1661 ntBASIC20.5■□□□□ 0.87
CHRM3P20309 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.5■□□□□ 0.87
CHRM3P20309 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRM3P20309 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHRM3P20309 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.5■□□□□ 0.87
CHRM3P20309 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHRM3P20309 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CHRM3P20309 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.49■□□□□ 0.87
CHRM3P20309 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHRM3P20309 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CHRM3P20309 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRM3P20309 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CHRM3P20309 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHRM3P20309 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHRM3P20309 RARRES2P6-201ENST00000567333 442 ntBASIC20.49■□□□□ 0.87
CHRM3P20309 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CHRM3P20309 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.49■□□□□ 0.87
CHRM3P20309 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms