Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL11A2P13942 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.63■■□□□ 1.69
COL11A2P13942 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL11A2P13942 KRASP1-201ENST00000407852 552 ntBASIC25.63■■□□□ 1.69
COL11A2P13942 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
COL11A2P13942 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL11A2P13942 SERP1-205ENST00000487153 657 ntTSL 4 BASIC25.63■■□□□ 1.69
COL11A2P13942 PENK-204ENST00000518770 863 ntTSL 2 BASIC25.63■■□□□ 1.69
COL11A2P13942 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL11A2P13942 AL023875.1-201ENST00000640777 796 ntBASIC25.63■■□□□ 1.69
COL11A2P13942 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.62■■□□□ 1.69
COL11A2P13942 AC092053.2-201ENST00000640557 1818 ntBASIC25.62■■□□□ 1.69
COL11A2P13942 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.62■■□□□ 1.69
COL11A2P13942 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.62■■□□□ 1.69
COL11A2P13942 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.62■■□□□ 1.69
COL11A2P13942 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC25.62■■□□□ 1.69
COL11A2P13942 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL11A2P13942 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.62■■□□□ 1.69
COL11A2P13942 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
COL11A2P13942 TK2-204ENST00000525974 1178 ntTSL 2 BASIC25.62■■□□□ 1.69
COL11A2P13942 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC25.62■■□□□ 1.69
COL11A2P13942 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC25.62■■□□□ 1.69
COL11A2P13942 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL11A2P13942 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL11A2P13942 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL11A2P13942 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.61■■□□□ 1.69
COL11A2P13942 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL11A2P13942 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
COL11A2P13942 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.61■■□□□ 1.69
COL11A2P13942 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL11A2P13942 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL11A2P13942 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.61■■□□□ 1.69
COL11A2P13942 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL11A2P13942 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL11A2P13942 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.61■■□□□ 1.69
COL11A2P13942 AC080038.3-201ENST00000623346 1952 ntBASIC25.61■■□□□ 1.69
COL11A2P13942 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.61■■□□□ 1.69
COL11A2P13942 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL11A2P13942 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL11A2P13942 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL11A2P13942 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL11A2P13942 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC25.6■■□□□ 1.69
COL11A2P13942 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC25.6■■□□□ 1.69
COL11A2P13942 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC25.6■■□□□ 1.69
COL11A2P13942 RN7SL850P-201ENST00000579959 291 ntBASIC25.6■■□□□ 1.69
COL11A2P13942 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL11A2P13942 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL11A2P13942 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
COL11A2P13942 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL11A2P13942 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
COL11A2P13942 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.6■■□□□ 1.69
COL11A2P13942 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
COL11A2P13942 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.6■■□□□ 1.69
COL11A2P13942 MIR4785-201ENST00000585005 73 ntBASIC25.6■■□□□ 1.69
COL11A2P13942 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC25.6■■□□□ 1.69
COL11A2P13942 AC133561.5-201ENST00000635547 218 ntBASIC25.6■■□□□ 1.69
COL11A2P13942 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL11A2P13942 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL11A2P13942 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL11A2P13942 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
COL11A2P13942 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.59■■□□□ 1.69
COL11A2P13942 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.59■■□□□ 1.69
COL11A2P13942 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL11A2P13942 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL11A2P13942 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.59■■□□□ 1.69
COL11A2P13942 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC25.59■■□□□ 1.69
COL11A2P13942 CBFB-203ENST00000561924 584 ntTSL 5 BASIC25.59■■□□□ 1.69
COL11A2P13942 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC25.59■■□□□ 1.69
COL11A2P13942 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
COL11A2P13942 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC25.59■■□□□ 1.69
COL11A2P13942 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.59■■□□□ 1.69
COL11A2P13942 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
COL11A2P13942 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL11A2P13942 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.58■■□□□ 1.69
COL11A2P13942 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL11A2P13942 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
COL11A2P13942 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL11A2P13942 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
COL11A2P13942 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC25.58■■□□□ 1.69
COL11A2P13942 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL11A2P13942 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL11A2P13942 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL11A2P13942 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
COL11A2P13942 MOK-233ENST00000524214 1539 ntTSL 2 BASIC25.58■■□□□ 1.69
COL11A2P13942 GGT1-206ENST00000404223 952 ntTSL 2 BASIC25.57■■□□□ 1.68
COL11A2P13942 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.57■■□□□ 1.68
COL11A2P13942 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.57■■□□□ 1.68
COL11A2P13942 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.57■■□□□ 1.68
COL11A2P13942 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL11A2P13942 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL11A2P13942 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL11A2P13942 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL11A2P13942 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
COL11A2P13942 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
COL11A2P13942 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL11A2P13942 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL11A2P13942 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL11A2P13942 AC127496.7-201ENST00000625110 1798 ntBASIC25.57■■□□□ 1.68
COL11A2P13942 NXN-202ENST00000537628 1340 ntTSL 3 BASIC25.57■■□□□ 1.68
COL11A2P13942 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms