Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.92■□□□□ 0.78
LINGO3P0C6S8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.91■□□□□ 0.78
LINGO3P0C6S8 AL355001.2-201ENST00000620617 1191 ntBASIC19.91■□□□□ 0.78
LINGO3P0C6S8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 AP000974.1-201ENST00000623909 2387 ntBASIC19.91■□□□□ 0.78
LINGO3P0C6S8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
LINGO3P0C6S8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LINGO3P0C6S8 AL158211.5-201ENST00000623583 2518 ntBASIC19.9■□□□□ 0.78
LINGO3P0C6S8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LINGO3P0C6S8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
LINGO3P0C6S8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 AC073314.1-201ENST00000568729 2216 ntBASIC19.89■□□□□ 0.77
LINGO3P0C6S8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 AC233992.3-201ENST00000607491 485 ntBASIC19.89■□□□□ 0.77
LINGO3P0C6S8 AC087239.1-201ENST00000622671 572 ntBASIC19.89■□□□□ 0.77
LINGO3P0C6S8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LINGO3P0C6S8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 MIR638-201ENST00000385237 100 ntBASIC19.88■□□□□ 0.77
LINGO3P0C6S8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 AP001330.3-201ENST00000520123 633 ntBASIC19.88■□□□□ 0.77
LINGO3P0C6S8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINGO3P0C6S8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 SUDS3P1-201ENST00000505831 966 ntBASIC19.87■□□□□ 0.77
LINGO3P0C6S8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
LINGO3P0C6S8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms