Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
FREM3P0C091 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FREM3P0C091 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FREM3P0C091 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
FREM3P0C091 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FREM3P0C091 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
FREM3P0C091 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
FREM3P0C091 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FREM3P0C091 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
FREM3P0C091 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.83■□□□□ 0.6
FREM3P0C091 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
FREM3P0C091 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.83■□□□□ 0.6
FREM3P0C091 AC073210.2-201ENST00000430369 194 ntBASIC18.83■□□□□ 0.6
FREM3P0C091 AC245052.3-201ENST00000450182 901 ntBASIC18.83■□□□□ 0.6
FREM3P0C091 AC105036.2-201ENST00000569468 176 ntBASIC18.83■□□□□ 0.6
FREM3P0C091 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
FREM3P0C091 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.83■□□□□ 0.6
FREM3P0C091 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FREM3P0C091 DUSP5P2-201ENST00000426873 1033 ntBASIC18.82■□□□□ 0.6
FREM3P0C091 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FREM3P0C091 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FREM3P0C091 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.82■□□□□ 0.6
FREM3P0C091 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FREM3P0C091 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FREM3P0C091 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.82■□□□□ 0.6
FREM3P0C091 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FREM3P0C091 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FREM3P0C091 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
FREM3P0C091 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.82■□□□□ 0.6
FREM3P0C091 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
FREM3P0C091 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
FREM3P0C091 AL512625.2-201ENST00000417533 625 ntBASIC18.81■□□□□ 0.6
FREM3P0C091 AC069152.1-201ENST00000438030 544 ntBASIC18.81■□□□□ 0.6
FREM3P0C091 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.81■□□□□ 0.6
FREM3P0C091 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.81■□□□□ 0.6
FREM3P0C091 AC083880.1-201ENST00000608266 535 ntBASIC18.81■□□□□ 0.6
FREM3P0C091 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FREM3P0C091 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
FREM3P0C091 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FREM3P0C091 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FREM3P0C091 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
FREM3P0C091 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.8■□□□□ 0.6
FREM3P0C091 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FREM3P0C091 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FREM3P0C091 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FREM3P0C091 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.8■□□□□ 0.6
FREM3P0C091 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.8■□□□□ 0.6
FREM3P0C091 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FREM3P0C091 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
FREM3P0C091 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FREM3P0C091 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
FREM3P0C091 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
FREM3P0C091 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FREM3P0C091 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.8■□□□□ 0.6
FREM3P0C091 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FREM3P0C091 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FREM3P0C091 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FREM3P0C091 AL024507.2-201ENST00000606070 2574 ntBASIC18.8■□□□□ 0.6
FREM3P0C091 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
FREM3P0C091 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FREM3P0C091 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FREM3P0C091 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
FREM3P0C091 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.8■□□□□ 0.6
FREM3P0C091 BX276092.2-201ENST00000417668 665 ntBASIC18.8■□□□□ 0.6
FREM3P0C091 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.8■□□□□ 0.6
FREM3P0C091 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
FREM3P0C091 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FREM3P0C091 AC010980.2-201ENST00000587099 1412 ntBASIC18.79■□□□□ 0.6
FREM3P0C091 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.79■□□□□ 0.6
FREM3P0C091 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
FREM3P0C091 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
FREM3P0C091 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FREM3P0C091 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
FREM3P0C091 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FREM3P0C091 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.79■□□□□ 0.6
FREM3P0C091 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.79■□□□□ 0.6
FREM3P0C091 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FREM3P0C091 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FREM3P0C091 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
FREM3P0C091 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FREM3P0C091 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
FREM3P0C091 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FREM3P0C091 OR10C1-204ENST00000622521 1039 ntBASIC18.79■□□□□ 0.6
FREM3P0C091 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.79■□□□□ 0.6
FREM3P0C091 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.79■□□□□ 0.6
FREM3P0C091 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
FREM3P0C091 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FREM3P0C091 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.78■□□□□ 0.6
FREM3P0C091 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FREM3P0C091 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FREM3P0C091 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FREM3P0C091 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
FREM3P0C091 TSPY6P-201ENST00000448518 926 ntBASIC18.78■□□□□ 0.6
FREM3P0C091 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.78■□□□□ 0.6
FREM3P0C091 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.78■□□□□ 0.6
FREM3P0C091 AC069236.1-201ENST00000604339 616 ntBASIC18.78■□□□□ 0.6
FREM3P0C091 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FREM3P0C091 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FREM3P0C091 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FREM3P0C091 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms