Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.7■□□□□ 0.9
APOA4P06727 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOA4P06727 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APOA4P06727 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA4P06727 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA4P06727 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APOA4P06727 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
APOA4P06727 AC026271.2-201ENST00000428091 497 ntBASIC20.69■□□□□ 0.9
APOA4P06727 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.69■□□□□ 0.9
APOA4P06727 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APOA4P06727 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.69■□□□□ 0.9
APOA4P06727 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.69■□□□□ 0.9
APOA4P06727 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA4P06727 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APOA4P06727 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
APOA4P06727 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA4P06727 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
APOA4P06727 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APOA4P06727 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOA4P06727 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APOA4P06727 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
APOA4P06727 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOA4P06727 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
APOA4P06727 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOA4P06727 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOA4P06727 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.68■□□□□ 0.9
APOA4P06727 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOA4P06727 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.68■□□□□ 0.9
APOA4P06727 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.68■□□□□ 0.9
APOA4P06727 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.68■□□□□ 0.9
APOA4P06727 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
APOA4P06727 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APOA4P06727 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.68■□□□□ 0.9
APOA4P06727 AC138907.5-202ENST00000569484 235 ntBASIC20.68■□□□□ 0.9
APOA4P06727 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.68■□□□□ 0.9
APOA4P06727 AC104187.1-201ENST00000607510 612 ntBASIC20.68■□□□□ 0.9
APOA4P06727 AC008175.2-201ENST00000612840 297 ntBASIC20.68■□□□□ 0.9
APOA4P06727 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
APOA4P06727 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOA4P06727 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
APOA4P06727 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.68■□□□□ 0.9
APOA4P06727 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOA4P06727 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.68■□□□□ 0.9
APOA4P06727 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APOA4P06727 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOA4P06727 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOA4P06727 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOA4P06727 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.67■□□□□ 0.9
APOA4P06727 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA4P06727 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA4P06727 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.67■□□□□ 0.9
APOA4P06727 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOA4P06727 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA4P06727 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA4P06727 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA4P06727 AP005212.1-201ENST00000581547 1997 ntBASIC20.67■□□□□ 0.9
APOA4P06727 PLK5-205ENST00000642079 1969 ntBASIC20.67■□□□□ 0.9
APOA4P06727 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA4P06727 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOA4P06727 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA4P06727 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.67■□□□□ 0.9
APOA4P06727 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
APOA4P06727 AC004854.2-201ENST00000608450 1441 ntBASIC20.67■□□□□ 0.9
APOA4P06727 AP004607.4-201ENST00000530158 1459 ntBASIC20.67■□□□□ 0.9
APOA4P06727 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOA4P06727 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOA4P06727 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOA4P06727 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
APOA4P06727 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOA4P06727 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
APOA4P06727 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
APOA4P06727 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOA4P06727 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOA4P06727 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.66■□□□□ 0.9
APOA4P06727 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.66■□□□□ 0.9
APOA4P06727 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.66■□□□□ 0.9
APOA4P06727 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOA4P06727 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.66■□□□□ 0.9
APOA4P06727 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.66■□□□□ 0.9
APOA4P06727 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.66■□□□□ 0.9
APOA4P06727 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.66■□□□□ 0.9
APOA4P06727 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
APOA4P06727 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.66■□□□□ 0.9
APOA4P06727 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.66■□□□□ 0.9
APOA4P06727 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
APOA4P06727 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOA4P06727 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.66■□□□□ 0.9
APOA4P06727 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOA4P06727 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
APOA4P06727 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOA4P06727 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOA4P06727 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOA4P06727 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
APOA4P06727 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
APOA4P06727 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOA4P06727 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
APOA4P06727 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
APOA4P06727 AC121338.2-201ENST00000622535 1744 ntBASIC20.65■□□□□ 0.9
APOA4P06727 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOA4P06727 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms