Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DQA2P01906 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQA2P01906 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.52■□□□□ 0.56
HLA-DQA2P01906 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
HLA-DQA2P01906 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQA2P01906 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQA2P01906 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQA2P01906 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQA2P01906 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.52■□□□□ 0.56
HLA-DQA2P01906 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQA2P01906 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.52■□□□□ 0.56
HLA-DQA2P01906 SUDS3P1-201ENST00000505831 966 ntBASIC18.52■□□□□ 0.56
HLA-DQA2P01906 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.52■□□□□ 0.56
HLA-DQA2P01906 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.52■□□□□ 0.56
HLA-DQA2P01906 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQA2P01906 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HLA-DQA2P01906 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
HLA-DQA2P01906 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.52■□□□□ 0.55
HLA-DQA2P01906 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DQA2P01906 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
HLA-DQA2P01906 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.52■□□□□ 0.55
HLA-DQA2P01906 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DQA2P01906 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HLA-DQA2P01906 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
HLA-DQA2P01906 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 PLK5-205ENST00000642079 1969 ntBASIC18.51■□□□□ 0.55
HLA-DQA2P01906 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 AC121338.2-201ENST00000622535 1744 ntBASIC18.51■□□□□ 0.55
HLA-DQA2P01906 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 LINC01006-201ENST00000333319 2292 ntBASIC18.51■□□□□ 0.55
HLA-DQA2P01906 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.51■□□□□ 0.55
HLA-DQA2P01906 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HLA-DQA2P01906 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DQA2P01906 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DQA2P01906 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DQA2P01906 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQA2P01906 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DQA2P01906 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DQA2P01906 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DQA2P01906 AL358852.1-201ENST00000623174 1268 ntBASIC18.5■□□□□ 0.55
HLA-DQA2P01906 LINC01521-201ENST00000504184 1943 ntBASIC18.5■□□□□ 0.55
HLA-DQA2P01906 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HLA-DQA2P01906 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DQA2P01906 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
HLA-DQA2P01906 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DQA2P01906 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 MIR6084-201ENST00000622012 110 ntBASIC18.49■□□□□ 0.55
HLA-DQA2P01906 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 AC073130.3-201ENST00000624389 2278 ntBASIC18.49■□□□□ 0.55
HLA-DQA2P01906 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DQA2P01906 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA2P01906 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA2P01906 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HLA-DQA2P01906 FEM1AP1-201ENST00000431297 1995 ntBASIC18.48■□□□□ 0.55
HLA-DQA2P01906 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DQA2P01906 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HLA-DQA2P01906 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DQA2P01906 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms