Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC3O95833 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLIC3O95833 BX323043.1-201ENST00000641006 1765 ntBASIC19.09■□□□□ 0.65
CLIC3O95833 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.09■□□□□ 0.65
CLIC3O95833 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC3O95833 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.08■□□□□ 0.65
CLIC3O95833 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLIC3O95833 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.08■□□□□ 0.65
CLIC3O95833 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLIC3O95833 AC125437.2-201ENST00000625180 2167 ntBASIC19.08■□□□□ 0.65
CLIC3O95833 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CLIC3O95833 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.08■□□□□ 0.65
CLIC3O95833 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.65
CLIC3O95833 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CLIC3O95833 AC006455.2-201ENST00000429931 906 ntBASIC19.08■□□□□ 0.64
CLIC3O95833 pRNA.6-201ENST00000610482 90 ntBASIC19.08■□□□□ 0.64
CLIC3O95833 pRNA.5-201ENST00000612139 90 ntBASIC19.08■□□□□ 0.64
CLIC3O95833 pRNA.11-201ENST00000618423 90 ntBASIC19.08■□□□□ 0.64
CLIC3O95833 pRNA.13-201ENST00000619112 90 ntBASIC19.08■□□□□ 0.64
CLIC3O95833 AC068587.7-201ENST00000641602 218 ntBASIC19.08■□□□□ 0.64
CLIC3O95833 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC3O95833 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC3O95833 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC3O95833 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC3O95833 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC3O95833 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CLIC3O95833 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC3O95833 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC3O95833 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLIC3O95833 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC3O95833 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.07■□□□□ 0.64
CLIC3O95833 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC3O95833 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.07■□□□□ 0.64
CLIC3O95833 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLIC3O95833 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC3O95833 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC3O95833 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC3O95833 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.07■□□□□ 0.64
CLIC3O95833 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.07■□□□□ 0.64
CLIC3O95833 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC3O95833 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLIC3O95833 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.07■□□□□ 0.64
CLIC3O95833 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.07■□□□□ 0.64
CLIC3O95833 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.07■□□□□ 0.64
CLIC3O95833 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC3O95833 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLIC3O95833 TCF3P1-201ENST00000423021 1937 ntBASIC19.07■□□□□ 0.64
CLIC3O95833 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC3O95833 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC3O95833 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLIC3O95833 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC3O95833 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC3O95833 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC3O95833 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CLIC3O95833 YBX1P4-201ENST00000392794 808 ntBASIC19.06■□□□□ 0.64
CLIC3O95833 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.06■□□□□ 0.64
CLIC3O95833 AC010141.3-201ENST00000456659 717 ntBASIC19.06■□□□□ 0.64
CLIC3O95833 AL031848.2-201ENST00000607670 837 ntBASIC19.06■□□□□ 0.64
CLIC3O95833 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC3O95833 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC3O95833 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC3O95833 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIC3O95833 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CLIC3O95833 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CLIC3O95833 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIC3O95833 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC3O95833 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIC3O95833 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CLIC3O95833 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC3O95833 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
CLIC3O95833 AC092028.1-203ENST00000608262 953 ntBASIC19.05■□□□□ 0.64
CLIC3O95833 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIC3O95833 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC3O95833 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC3O95833 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CLIC3O95833 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CLIC3O95833 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC3O95833 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC3O95833 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC3O95833 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC3O95833 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC3O95833 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC3O95833 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.04■□□□□ 0.64
CLIC3O95833 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC3O95833 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC3O95833 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms