Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
SNX4O95219 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX4O95219 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX4O95219 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX4O95219 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX4O95219 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX4O95219 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX4O95219 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX4O95219 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX4O95219 AC004911.1-201ENST00000416316 871 ntBASIC19.34■□□□□ 0.69
SNX4O95219 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SNX4O95219 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX4O95219 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX4O95219 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX4O95219 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX4O95219 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.34■□□□□ 0.69
SNX4O95219 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX4O95219 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX4O95219 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.34■□□□□ 0.69
SNX4O95219 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX4O95219 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX4O95219 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX4O95219 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX4O95219 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX4O95219 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX4O95219 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX4O95219 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX4O95219 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.33■□□□□ 0.69
SNX4O95219 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX4O95219 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SNX4O95219 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX4O95219 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX4O95219 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.33■□□□□ 0.68
SNX4O95219 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.33■□□□□ 0.68
SNX4O95219 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SNX4O95219 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.33■□□□□ 0.68
SNX4O95219 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX4O95219 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.33■□□□□ 0.68
SNX4O95219 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX4O95219 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX4O95219 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX4O95219 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SNX4O95219 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SNX4O95219 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SNX4O95219 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.32■□□□□ 0.68
SNX4O95219 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX4O95219 AC008175.2-201ENST00000612840 297 ntBASIC19.32■□□□□ 0.68
SNX4O95219 BID-214ENST00000617586 542 ntTSL 5 BASIC19.32■□□□□ 0.68
SNX4O95219 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX4O95219 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SNX4O95219 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX4O95219 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX4O95219 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX4O95219 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX4O95219 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX4O95219 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX4O95219 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX4O95219 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX4O95219 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX4O95219 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX4O95219 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SNX4O95219 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX4O95219 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNX4O95219 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
SNX4O95219 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX4O95219 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNX4O95219 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX4O95219 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNX4O95219 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.31■□□□□ 0.68
SNX4O95219 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNX4O95219 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNX4O95219 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX4O95219 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX4O95219 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX4O95219 AC120498.10-201ENST00000621827 505 ntBASIC19.31■□□□□ 0.68
SNX4O95219 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX4O95219 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SNX4O95219 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SNX4O95219 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
SNX4O95219 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.31■□□□□ 0.68
SNX4O95219 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX4O95219 AC244015.2-201ENST00000616358 1861 ntBASIC19.31■□□□□ 0.68
SNX4O95219 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SNX4O95219 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SNX4O95219 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SNX4O95219 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX4O95219 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX4O95219 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SNX4O95219 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX4O95219 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX4O95219 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX4O95219 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX4O95219 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX4O95219 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX4O95219 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX4O95219 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX4O95219 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
SNX4O95219 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX4O95219 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX4O95219 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms