Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
UPK3AO75631 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK3AO75631 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
UPK3AO75631 KRT18P20-201ENST00000548986 1279 ntBASIC18.51■□□□□ 0.55
UPK3AO75631 UBE2DNL-204ENST00000602536 740 ntBASIC18.51■□□□□ 0.55
UPK3AO75631 AC120498.10-201ENST00000621827 505 ntBASIC18.51■□□□□ 0.55
UPK3AO75631 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
UPK3AO75631 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK3AO75631 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.51■□□□□ 0.55
UPK3AO75631 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK3AO75631 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK3AO75631 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK3AO75631 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.51■□□□□ 0.55
UPK3AO75631 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK3AO75631 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK3AO75631 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK3AO75631 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK3AO75631 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK3AO75631 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.5■□□□□ 0.55
UPK3AO75631 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
UPK3AO75631 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK3AO75631 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPK3AO75631 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK3AO75631 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UPK3AO75631 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPK3AO75631 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPK3AO75631 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
UPK3AO75631 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK3AO75631 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK3AO75631 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UPK3AO75631 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.5■□□□□ 0.55
UPK3AO75631 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
UPK3AO75631 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK3AO75631 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
UPK3AO75631 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
UPK3AO75631 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK3AO75631 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.49■□□□□ 0.55
UPK3AO75631 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.49■□□□□ 0.55
UPK3AO75631 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.49■□□□□ 0.55
UPK3AO75631 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.49■□□□□ 0.55
UPK3AO75631 AC016769.1-201ENST00000409132 1010 ntBASIC18.49■□□□□ 0.55
UPK3AO75631 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.49■□□□□ 0.55
UPK3AO75631 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.49■□□□□ 0.55
UPK3AO75631 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.49■□□□□ 0.55
UPK3AO75631 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.49■□□□□ 0.55
UPK3AO75631 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPK3AO75631 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPK3AO75631 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.49■□□□□ 0.55
UPK3AO75631 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK3AO75631 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPK3AO75631 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.49■□□□□ 0.55
UPK3AO75631 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
UPK3AO75631 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.49■□□□□ 0.55
UPK3AO75631 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK3AO75631 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
UPK3AO75631 KRT16P2-201ENST00000414673 1423 ntBASIC18.49■□□□□ 0.55
UPK3AO75631 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.48■□□□□ 0.55
UPK3AO75631 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK3AO75631 PLK5-205ENST00000642079 1969 ntBASIC18.48■□□□□ 0.55
UPK3AO75631 AC006128.1-201ENST00000624704 1661 ntBASIC18.48■□□□□ 0.55
UPK3AO75631 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.48■□□□□ 0.55
UPK3AO75631 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPK3AO75631 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK3AO75631 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.48■□□□□ 0.55
UPK3AO75631 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.48■□□□□ 0.55
UPK3AO75631 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK3AO75631 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK3AO75631 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.48■□□□□ 0.55
UPK3AO75631 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.48■□□□□ 0.55
UPK3AO75631 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.48■□□□□ 0.55
UPK3AO75631 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.48■□□□□ 0.55
UPK3AO75631 IKBKGP1-201ENST00000612193 1073 ntBASIC18.48■□□□□ 0.55
UPK3AO75631 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
UPK3AO75631 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPK3AO75631 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.48■□□□□ 0.55
UPK3AO75631 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK3AO75631 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK3AO75631 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UPK3AO75631 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPK3AO75631 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK3AO75631 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPK3AO75631 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.47■□□□□ 0.55
UPK3AO75631 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.47■□□□□ 0.55
UPK3AO75631 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK3AO75631 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UPK3AO75631 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK3AO75631 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UPK3AO75631 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UPK3AO75631 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPK3AO75631 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.47■□□□□ 0.55
UPK3AO75631 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK3AO75631 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK3AO75631 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK3AO75631 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
UPK3AO75631 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
UPK3AO75631 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
UPK3AO75631 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK3AO75631 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK3AO75631 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK3AO75631 AC092667.1-201ENST00000434301 2586 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms