Protein–RNA interactions for Protein: O75462

CRLF1, Cytokine receptor-like factor 1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1O75462 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRLF1O75462 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CRLF1O75462 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRLF1O75462 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.78■□□□□ 0.28
CRLF1O75462 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CRLF1O75462 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CRLF1O75462 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.78■□□□□ 0.28
CRLF1O75462 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CRLF1O75462 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.78■□□□□ 0.28
CRLF1O75462 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRLF1O75462 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CRLF1O75462 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CRLF1O75462 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRLF1O75462 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CRLF1O75462 LINC01124-201ENST00000409786 2117 ntBASIC16.78■□□□□ 0.28
CRLF1O75462 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CRLF1O75462 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CRLF1O75462 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CRLF1O75462 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CRLF1O75462 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.77■□□□□ 0.28
CRLF1O75462 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CRLF1O75462 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CRLF1O75462 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CRLF1O75462 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.77■□□□□ 0.28
CRLF1O75462 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.77■□□□□ 0.28
CRLF1O75462 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CRLF1O75462 AC120498.8-201ENST00000614275 531 ntBASIC16.77■□□□□ 0.28
CRLF1O75462 AC005363.2-201ENST00000618631 242 ntBASIC16.77■□□□□ 0.28
CRLF1O75462 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CRLF1O75462 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CRLF1O75462 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CRLF1O75462 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CRLF1O75462 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CRLF1O75462 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.77■□□□□ 0.27
CRLF1O75462 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CRLF1O75462 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CRLF1O75462 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.76■□□□□ 0.27
CRLF1O75462 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CRLF1O75462 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CRLF1O75462 AP003071.4-201ENST00000562276 1284 ntBASIC16.76■□□□□ 0.27
CRLF1O75462 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.76■□□□□ 0.27
CRLF1O75462 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 ABCB10P4-201ENST00000566803 2184 ntBASIC16.76■□□□□ 0.27
CRLF1O75462 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.76■□□□□ 0.27
CRLF1O75462 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.76■□□□□ 0.27
CRLF1O75462 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CRLF1O75462 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CRLF1O75462 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CRLF1O75462 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CRLF1O75462 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CRLF1O75462 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CRLF1O75462 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CRLF1O75462 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.75■□□□□ 0.27
CRLF1O75462 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.75■□□□□ 0.27
CRLF1O75462 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CRLF1O75462 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.75■□□□□ 0.27
CRLF1O75462 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.75■□□□□ 0.27
CRLF1O75462 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.75■□□□□ 0.27
CRLF1O75462 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CRLF1O75462 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CRLF1O75462 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CRLF1O75462 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.75■□□□□ 0.27
CRLF1O75462 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CRLF1O75462 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CRLF1O75462 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CRLF1O75462 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CRLF1O75462 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF1O75462 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CRLF1O75462 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF1O75462 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.74■□□□□ 0.27
CRLF1O75462 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF1O75462 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF1O75462 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF1O75462 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF1O75462 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.74■□□□□ 0.27
CRLF1O75462 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.74■□□□□ 0.27
CRLF1O75462 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF1O75462 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
CRLF1O75462 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CRLF1O75462 AL355355.2-201ENST00000442321 338 ntBASIC16.74■□□□□ 0.27
CRLF1O75462 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.74■□□□□ 0.27
CRLF1O75462 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.74■□□□□ 0.27
CRLF1O75462 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CRLF1O75462 AC145285.6-201ENST00000604632 637 ntBASIC16.74■□□□□ 0.27
CRLF1O75462 AC105020.6-201ENST00000621523 1217 ntBASIC16.74■□□□□ 0.27
CRLF1O75462 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CRLF1O75462 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms