Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRAMEF4O60810 AC091799.1-201ENST00000422823 811 ntBASIC19.93■□□□□ 0.78
PRAMEF4O60810 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.93■□□□□ 0.78
PRAMEF4O60810 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.93■□□□□ 0.78
PRAMEF4O60810 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRAMEF4O60810 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRAMEF4O60810 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.93■□□□□ 0.78
PRAMEF4O60810 AC092667.1-201ENST00000434301 2586 ntBASIC19.93■□□□□ 0.78
PRAMEF4O60810 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRAMEF4O60810 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PRAMEF4O60810 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PRAMEF4O60810 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PRAMEF4O60810 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRAMEF4O60810 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.93■□□□□ 0.78
PRAMEF4O60810 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
PRAMEF4O60810 LINC01006-201ENST00000333319 2292 ntBASIC19.92■□□□□ 0.78
PRAMEF4O60810 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.92■□□□□ 0.78
PRAMEF4O60810 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.92■□□□□ 0.78
PRAMEF4O60810 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRAMEF4O60810 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.92■□□□□ 0.78
PRAMEF4O60810 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.92■□□□□ 0.78
PRAMEF4O60810 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRAMEF4O60810 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.92■□□□□ 0.78
PRAMEF4O60810 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.92■□□□□ 0.78
PRAMEF4O60810 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.92■□□□□ 0.78
PRAMEF4O60810 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.92■□□□□ 0.78
PRAMEF4O60810 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.92■□□□□ 0.78
PRAMEF4O60810 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PRAMEF4O60810 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRAMEF4O60810 AC007225.1-201ENST00000566331 1836 ntBASIC19.92■□□□□ 0.78
PRAMEF4O60810 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PRAMEF4O60810 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PRAMEF4O60810 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEF4O60810 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEF4O60810 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.91■□□□□ 0.78
PRAMEF4O60810 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PRAMEF4O60810 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEF4O60810 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEF4O60810 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PRAMEF4O60810 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.91■□□□□ 0.78
PRAMEF4O60810 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.91■□□□□ 0.78
PRAMEF4O60810 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.91■□□□□ 0.78
PRAMEF4O60810 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.91■□□□□ 0.78
PRAMEF4O60810 AC243732.1-201ENST00000612648 864 ntBASIC19.91■□□□□ 0.78
PRAMEF4O60810 MYCNOS-205ENST00000641950 531 ntBASIC19.91■□□□□ 0.78
PRAMEF4O60810 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEF4O60810 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.91■□□□□ 0.78
PRAMEF4O60810 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEF4O60810 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF4O60810 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.9■□□□□ 0.78
PRAMEF4O60810 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF4O60810 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF4O60810 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF4O60810 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PRAMEF4O60810 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF4O60810 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF4O60810 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.9■□□□□ 0.78
PRAMEF4O60810 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF4O60810 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF4O60810 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PRAMEF4O60810 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.9■□□□□ 0.78
PRAMEF4O60810 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.9■□□□□ 0.78
PRAMEF4O60810 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.9■□□□□ 0.78
PRAMEF4O60810 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF4O60810 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF4O60810 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PRAMEF4O60810 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.9■□□□□ 0.78
PRAMEF4O60810 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PRAMEF4O60810 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF4O60810 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF4O60810 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEF4O60810 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.89■□□□□ 0.78
PRAMEF4O60810 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PRAMEF4O60810 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PRAMEF4O60810 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF4O60810 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF4O60810 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF4O60810 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PRAMEF4O60810 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF4O60810 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.89■□□□□ 0.77
PRAMEF4O60810 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.89■□□□□ 0.77
PRAMEF4O60810 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.89■□□□□ 0.77
PRAMEF4O60810 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.89■□□□□ 0.77
PRAMEF4O60810 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.89■□□□□ 0.77
PRAMEF4O60810 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF4O60810 AL162430.1-201ENST00000480705 870 ntBASIC19.89■□□□□ 0.77
PRAMEF4O60810 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF4O60810 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.89■□□□□ 0.77
PRAMEF4O60810 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
PRAMEF4O60810 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF4O60810 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.89■□□□□ 0.77
PRAMEF4O60810 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.89■□□□□ 0.77
PRAMEF4O60810 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.89■□□□□ 0.77
PRAMEF4O60810 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.89■□□□□ 0.77
PRAMEF4O60810 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF4O60810 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PRAMEF4O60810 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.88■□□□□ 0.77
PRAMEF4O60810 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF4O60810 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRAMEF4O60810 AP005212.1-201ENST00000581547 1997 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms