Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.6■□□□□ 0.73
PROM1O43490 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.6■□□□□ 0.73
PROM1O43490 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PROM1O43490 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PROM1O43490 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.6■□□□□ 0.73
PROM1O43490 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PROM1O43490 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.6■□□□□ 0.73
PROM1O43490 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PROM1O43490 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.6■□□□□ 0.73
PROM1O43490 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.6■□□□□ 0.73
PROM1O43490 AC243732.1-201ENST00000612648 864 ntBASIC19.6■□□□□ 0.73
PROM1O43490 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.6■□□□□ 0.73
PROM1O43490 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.6■□□□□ 0.73
PROM1O43490 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PROM1O43490 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PROM1O43490 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PROM1O43490 AC121338.2-201ENST00000622535 1744 ntBASIC19.59■□□□□ 0.73
PROM1O43490 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PROM1O43490 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PROM1O43490 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PROM1O43490 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PROM1O43490 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PROM1O43490 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.59■□□□□ 0.73
PROM1O43490 AC006015.1-201ENST00000429970 570 ntBASIC19.59■□□□□ 0.73
PROM1O43490 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
PROM1O43490 AC022517.1-201ENST00000592429 346 ntBASIC19.59■□□□□ 0.73
PROM1O43490 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.59■□□□□ 0.73
PROM1O43490 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.59■□□□□ 0.73
PROM1O43490 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
PROM1O43490 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PROM1O43490 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
PROM1O43490 PLK5-205ENST00000642079 1969 ntBASIC19.59■□□□□ 0.73
PROM1O43490 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.59■□□□□ 0.73
PROM1O43490 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PROM1O43490 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PROM1O43490 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PROM1O43490 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PROM1O43490 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PROM1O43490 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
PROM1O43490 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.58■□□□□ 0.73
PROM1O43490 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
PROM1O43490 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PROM1O43490 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PROM1O43490 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PROM1O43490 AC016769.1-201ENST00000409132 1010 ntBASIC19.58■□□□□ 0.72
PROM1O43490 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PROM1O43490 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.58■□□□□ 0.72
PROM1O43490 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.58■□□□□ 0.72
PROM1O43490 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PROM1O43490 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PROM1O43490 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PROM1O43490 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PROM1O43490 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PROM1O43490 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PROM1O43490 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PROM1O43490 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PROM1O43490 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PROM1O43490 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PROM1O43490 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PROM1O43490 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PROM1O43490 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PROM1O43490 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PROM1O43490 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PROM1O43490 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.57■□□□□ 0.72
PROM1O43490 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PROM1O43490 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PROM1O43490 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.57■□□□□ 0.72
PROM1O43490 IKBKGP1-201ENST00000612193 1073 ntBASIC19.57■□□□□ 0.72
PROM1O43490 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
PROM1O43490 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PROM1O43490 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PROM1O43490 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PROM1O43490 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PROM1O43490 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PROM1O43490 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PROM1O43490 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.56■□□□□ 0.72
PROM1O43490 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.56■□□□□ 0.72
PROM1O43490 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PROM1O43490 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PROM1O43490 AC011484.1-201ENST00000377652 1995 ntBASIC19.56■□□□□ 0.72
PROM1O43490 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.56■□□□□ 0.72
PROM1O43490 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.56■□□□□ 0.72
PROM1O43490 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.56■□□□□ 0.72
PROM1O43490 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PROM1O43490 AC010536.3-201ENST00000620306 533 ntBASIC19.56■□□□□ 0.72
PROM1O43490 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.56■□□□□ 0.72
PROM1O43490 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.56■□□□□ 0.72
PROM1O43490 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
PROM1O43490 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PROM1O43490 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PROM1O43490 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PROM1O43490 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PROM1O43490 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PROM1O43490 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PROM1O43490 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PROM1O43490 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PROM1O43490 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.55■□□□□ 0.72
PROM1O43490 AC091799.1-201ENST00000422823 811 ntBASIC19.55■□□□□ 0.72
PROM1O43490 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.55■□□□□ 0.72
PROM1O43490 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms