Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX4O43316 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX4O43316 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PAX4O43316 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PAX4O43316 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PAX4O43316 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX4O43316 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
PAX4O43316 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PAX4O43316 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
PAX4O43316 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
PAX4O43316 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX4O43316 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PAX4O43316 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PAX4O43316 AC004854.2-201ENST00000608450 1441 ntBASIC14.75□□□□□ -0.05
PAX4O43316 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC14.75□□□□□ -0.05
PAX4O43316 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX4O43316 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX4O43316 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX4O43316 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX4O43316 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.74□□□□□ -0.05
PAX4O43316 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PAX4O43316 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.74□□□□□ -0.05
PAX4O43316 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PAX4O43316 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX4O43316 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
PAX4O43316 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PAX4O43316 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.74□□□□□ -0.05
PAX4O43316 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
PAX4O43316 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PAX4O43316 AC026271.2-201ENST00000428091 497 ntBASIC14.74□□□□□ -0.05
PAX4O43316 AP001160.3-201ENST00000601484 763 ntBASIC14.74□□□□□ -0.05
PAX4O43316 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PAX4O43316 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PAX4O43316 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX4O43316 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX4O43316 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PAX4O43316 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.74□□□□□ -0.05
PAX4O43316 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX4O43316 AP004607.4-201ENST00000530158 1459 ntBASIC14.74□□□□□ -0.05
PAX4O43316 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
PAX4O43316 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX4O43316 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PAX4O43316 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.74□□□□□ -0.05
PAX4O43316 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
PAX4O43316 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
PAX4O43316 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PAX4O43316 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC14.73□□□□□ -0.05
PAX4O43316 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX4O43316 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX4O43316 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX4O43316 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.73□□□□□ -0.05
PAX4O43316 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.73□□□□□ -0.05
PAX4O43316 AC010141.2-201ENST00000452426 721 ntBASIC14.73□□□□□ -0.05
PAX4O43316 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.73□□□□□ -0.05
PAX4O43316 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
PAX4O43316 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PAX4O43316 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX4O43316 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PAX4O43316 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PAX4O43316 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PAX4O43316 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PAX4O43316 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PAX4O43316 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.73□□□□□ -0.05
PAX4O43316 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.73□□□□□ -0.05
PAX4O43316 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PAX4O43316 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX4O43316 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PAX4O43316 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX4O43316 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PAX4O43316 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX4O43316 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC14.72□□□□□ -0.05
PAX4O43316 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX4O43316 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX4O43316 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.72□□□□□ -0.05
PAX4O43316 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PAX4O43316 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PAX4O43316 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.72□□□□□ -0.05
PAX4O43316 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PAX4O43316 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PAX4O43316 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.72□□□□□ -0.05
PAX4O43316 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX4O43316 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX4O43316 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PAX4O43316 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.72□□□□□ -0.05
PAX4O43316 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX4O43316 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PAX4O43316 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PAX4O43316 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
PAX4O43316 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PAX4O43316 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
PAX4O43316 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.71□□□□□ -0.05
PAX4O43316 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.71□□□□□ -0.05
PAX4O43316 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PAX4O43316 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.71□□□□□ -0.05
PAX4O43316 AC061975.6-201ENST00000579045 1553 ntBASIC14.71□□□□□ -0.05
PAX4O43316 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PAX4O43316 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PAX4O43316 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PAX4O43316 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
PAX4O43316 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms