Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC01548A6NM66 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01548A6NM66 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01548A6NM66 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LINC01548A6NM66 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.34■□□□□ 0.21
LINC01548A6NM66 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01548A6NM66 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01548A6NM66 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01548A6NM66 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01548A6NM66 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01548A6NM66 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.34■□□□□ 0.21
LINC01548A6NM66 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LINC01548A6NM66 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.34■□□□□ 0.21
LINC01548A6NM66 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.34■□□□□ 0.21
LINC01548A6NM66 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.34■□□□□ 0.21
LINC01548A6NM66 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01548A6NM66 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01548A6NM66 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LINC01548A6NM66 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01548A6NM66 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01548A6NM66 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINC01548A6NM66 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.21
LINC01548A6NM66 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINC01548A6NM66 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01548A6NM66 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01548A6NM66 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01548A6NM66 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01548A6NM66 HLA-L-209ENST00000420110 1011 ntBASIC16.33■□□□□ 0.2
LINC01548A6NM66 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC01548A6NM66 AC093787.1-201ENST00000450396 207 ntBASIC16.33■□□□□ 0.2
LINC01548A6NM66 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC01548A6NM66 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LINC01548A6NM66 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC01548A6NM66 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01548A6NM66 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LINC01548A6NM66 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01548A6NM66 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01548A6NM66 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC01548A6NM66 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01548A6NM66 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01548A6NM66 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01548A6NM66 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01548A6NM66 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LINC01548A6NM66 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01548A6NM66 ID1-201ENST00000376105 1233 ntBASIC16.32■□□□□ 0.2
LINC01548A6NM66 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC01548A6NM66 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01548A6NM66 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01548A6NM66 AC105036.2-201ENST00000569468 176 ntBASIC16.32■□□□□ 0.2
LINC01548A6NM66 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC01548A6NM66 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
LINC01548A6NM66 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01548A6NM66 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC01548A6NM66 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC01548A6NM66 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01548A6NM66 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01548A6NM66 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01548A6NM66 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LINC01548A6NM66 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01548A6NM66 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC01548A6NM66 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01548A6NM66 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01548A6NM66 GPX1P1-201ENST00000388829 606 ntBASIC16.31■□□□□ 0.2
LINC01548A6NM66 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LINC01548A6NM66 AF201337.1-201ENST00000520239 748 ntBASIC16.31■□□□□ 0.2
LINC01548A6NM66 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.31■□□□□ 0.2
LINC01548A6NM66 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.31■□□□□ 0.2
LINC01548A6NM66 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01548A6NM66 AC133552.2-202ENST00000575694 574 ntBASIC16.31■□□□□ 0.2
LINC01548A6NM66 AL121832.2-201ENST00000610979 668 ntBASIC16.31■□□□□ 0.2
LINC01548A6NM66 AL109923.1-201ENST00000618799 583 ntBASIC16.31■□□□□ 0.2
LINC01548A6NM66 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LINC01548A6NM66 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01548A6NM66 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01548A6NM66 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01548A6NM66 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LINC01548A6NM66 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LINC01548A6NM66 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01548A6NM66 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01548A6NM66 AC116050.2-201ENST00000612102 1779 ntBASIC16.31■□□□□ 0.2
LINC01548A6NM66 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01548A6NM66 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC01548A6NM66 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01548A6NM66 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC01548A6NM66 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.3■□□□□ 0.2
LINC01548A6NM66 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01548A6NM66 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC01548A6NM66 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC01548A6NM66 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.3■□□□□ 0.2
LINC01548A6NM66 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.3■□□□□ 0.2
LINC01548A6NM66 RARRES2P4-201ENST00000514074 484 ntBASIC16.3■□□□□ 0.2
LINC01548A6NM66 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LINC01548A6NM66 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC01548A6NM66 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01548A6NM66 AC104771.1-201ENST00000603335 964 ntBASIC16.3■□□□□ 0.2
LINC01548A6NM66 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01548A6NM66 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01548A6NM66 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
LINC01548A6NM66 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01548A6NM66 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms