Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.51■□□□□ 0.23
CGB1A6NKQ9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 AC073314.1-201ENST00000568729 2216 ntBASIC16.5■□□□□ 0.23
CGB1A6NKQ9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CGB1A6NKQ9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 AP005212.1-201ENST00000581547 1997 ntBASIC16.49■□□□□ 0.23
CGB1A6NKQ9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CGB1A6NKQ9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CGB1A6NKQ9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CGB1A6NKQ9 SLC25A24-204ENST00000569674 2357 ntBASIC16.48■□□□□ 0.23
CGB1A6NKQ9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CGB1A6NKQ9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CGB1A6NKQ9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CGB1A6NKQ9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CGB1A6NKQ9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.48■□□□□ 0.23
CGB1A6NKQ9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.48■□□□□ 0.23
CGB1A6NKQ9 AC138907.5-202ENST00000569484 235 ntBASIC16.48■□□□□ 0.23
CGB1A6NKQ9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.48■□□□□ 0.23
CGB1A6NKQ9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.48■□□□□ 0.23
CGB1A6NKQ9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CGB1A6NKQ9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CGB1A6NKQ9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.48■□□□□ 0.23
CGB1A6NKQ9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CGB1A6NKQ9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.47■□□□□ 0.23
CGB1A6NKQ9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms