Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MBD3L5A6NJ08 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MBD3L5A6NJ08 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.27■□□□□ 0.52
MBD3L5A6NJ08 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MBD3L5A6NJ08 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MBD3L5A6NJ08 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 AC012676.1-201ENST00000574705 1949 ntBASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MBD3L5A6NJ08 AC087633.2-202ENST00000565166 1439 ntBASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 AC244015.2-201ENST00000616358 1861 ntBASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 AP003097.1-201ENST00000530657 1135 ntBASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MBD3L5A6NJ08 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 PGM5P4-201ENST00000421970 445 ntBASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 AC006058.3-201ENST00000606217 1069 ntBASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MBD3L5A6NJ08 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.23■□□□□ 0.51
MBD3L5A6NJ08 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 AC128676.1-201ENST00000454392 318 ntBASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 PNMA6B-201ENST00000538162 1200 ntBASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
MBD3L5A6NJ08 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MBD3L5A6NJ08 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms