Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CCDC144AA2RUR9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CCDC144AA2RUR9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC29.92■■■□□ 2.38
CCDC144AA2RUR9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CCDC144AA2RUR9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC29.91■■■□□ 2.38
CCDC144AA2RUR9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC144AA2RUR9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC29.91■■■□□ 2.38
CCDC144AA2RUR9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
CCDC144AA2RUR9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC144AA2RUR9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC144AA2RUR9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
CCDC144AA2RUR9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
CCDC144AA2RUR9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC29.9■■■□□ 2.38
CCDC144AA2RUR9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC29.9■■■□□ 2.38
CCDC144AA2RUR9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC29.9■■■□□ 2.38
CCDC144AA2RUR9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
CCDC144AA2RUR9 DET1-205ENST00000558413 583 ntTSL 4 BASIC29.9■■■□□ 2.38
CCDC144AA2RUR9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
CCDC144AA2RUR9 AC006058.3-201ENST00000606217 1069 ntBASIC29.9■■■□□ 2.38
CCDC144AA2RUR9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC29.9■■■□□ 2.38
CCDC144AA2RUR9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC29.89■■■□□ 2.38
CCDC144AA2RUR9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CCDC144AA2RUR9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC29.89■■■□□ 2.38
CCDC144AA2RUR9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC29.89■■■□□ 2.38
CCDC144AA2RUR9 AC244015.2-201ENST00000616358 1861 ntBASIC29.89■■■□□ 2.38
CCDC144AA2RUR9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CCDC144AA2RUR9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
CCDC144AA2RUR9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
CCDC144AA2RUR9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
CCDC144AA2RUR9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 AC008403.3-201ENST00000598924 454 ntBASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 PNMA6B-201ENST00000538162 1200 ntBASIC29.88■■■□□ 2.37
CCDC144AA2RUR9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CCDC144AA2RUR9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
CCDC144AA2RUR9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC29.87■■■□□ 2.37
CCDC144AA2RUR9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC29.87■■■□□ 2.37
CCDC144AA2RUR9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC29.87■■■□□ 2.37
CCDC144AA2RUR9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CCDC144AA2RUR9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
CCDC144AA2RUR9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CCDC144AA2RUR9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
CCDC144AA2RUR9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC29.87■■■□□ 2.37
CCDC144AA2RUR9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CCDC144AA2RUR9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 AC128676.1-201ENST00000454392 318 ntBASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 RPS2P52-201ENST00000469610 820 ntBASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC144AA2RUR9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 GCSHP5-201ENST00000443090 522 ntBASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 HES2-205ENST00000487437 968 ntTSL 3 BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC144AA2RUR9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC144AA2RUR9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
CCDC144AA2RUR9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC29.84■■■□□ 2.37
CCDC144AA2RUR9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC29.84■■■□□ 2.37
CCDC144AA2RUR9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
CCDC144AA2RUR9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC29.84■■■□□ 2.37
CCDC144AA2RUR9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC144AA2RUR9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC144AA2RUR9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC144AA2RUR9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC29.84■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms