Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.65■■□□□ 1.54
CLRN2A0PK11 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
CLRN2A0PK11 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLRN2A0PK11 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC24.65■■□□□ 1.54
CLRN2A0PK11 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC24.65■■□□□ 1.54
CLRN2A0PK11 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC24.65■■□□□ 1.54
CLRN2A0PK11 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLRN2A0PK11 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLRN2A0PK11 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLRN2A0PK11 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLRN2A0PK11 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
CLRN2A0PK11 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CLRN2A0PK11 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CLRN2A0PK11 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.64■■□□□ 1.54
CLRN2A0PK11 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC24.64■■□□□ 1.54
CLRN2A0PK11 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.64■■□□□ 1.54
CLRN2A0PK11 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CLRN2A0PK11 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.54
CLRN2A0PK11 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CLRN2A0PK11 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.64■■□□□ 1.54
CLRN2A0PK11 POM121L13P-201ENST00000422362 380 ntBASIC24.64■■□□□ 1.54
CLRN2A0PK11 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
CLRN2A0PK11 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
CLRN2A0PK11 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
CLRN2A0PK11 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CLRN2A0PK11 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.64■■□□□ 1.53
CLRN2A0PK11 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
CLRN2A0PK11 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.64■■□□□ 1.53
CLRN2A0PK11 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CLRN2A0PK11 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CLRN2A0PK11 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLRN2A0PK11 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLRN2A0PK11 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLRN2A0PK11 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLRN2A0PK11 AC116050.2-201ENST00000612102 1779 ntBASIC24.63■■□□□ 1.53
CLRN2A0PK11 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
CLRN2A0PK11 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLRN2A0PK11 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLRN2A0PK11 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC24.63■■□□□ 1.53
CLRN2A0PK11 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
CLRN2A0PK11 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLRN2A0PK11 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC24.63■■□□□ 1.53
CLRN2A0PK11 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CLRN2A0PK11 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
CLRN2A0PK11 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC24.63■■□□□ 1.53
CLRN2A0PK11 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.63■■□□□ 1.53
CLRN2A0PK11 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLRN2A0PK11 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLRN2A0PK11 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLRN2A0PK11 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CLRN2A0PK11 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CLRN2A0PK11 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CLRN2A0PK11 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC24.62■■□□□ 1.53
CLRN2A0PK11 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.62■■□□□ 1.53
CLRN2A0PK11 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.62■■□□□ 1.53
CLRN2A0PK11 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLRN2A0PK11 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLRN2A0PK11 ECEL1P3-201ENST00000427961 737 ntBASIC24.62■■□□□ 1.53
CLRN2A0PK11 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
CLRN2A0PK11 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CLRN2A0PK11 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CLRN2A0PK11 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
CLRN2A0PK11 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLRN2A0PK11 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLRN2A0PK11 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.62■■□□□ 1.53
CLRN2A0PK11 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLRN2A0PK11 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLRN2A0PK11 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.61■■□□□ 1.53
CLRN2A0PK11 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC24.61■■□□□ 1.53
CLRN2A0PK11 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLRN2A0PK11 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.61■■□□□ 1.53
CLRN2A0PK11 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLRN2A0PK11 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CLRN2A0PK11 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLRN2A0PK11 GXYLT1P3-201ENST00000453058 1193 ntBASIC24.61■■□□□ 1.53
CLRN2A0PK11 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC24.61■■□□□ 1.53
CLRN2A0PK11 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CLRN2A0PK11 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CLRN2A0PK11 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.61■■□□□ 1.53
CLRN2A0PK11 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.61■■□□□ 1.53
CLRN2A0PK11 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC24.61■■□□□ 1.53
CLRN2A0PK11 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
CLRN2A0PK11 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLRN2A0PK11 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLRN2A0PK11 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLRN2A0PK11 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.61■■□□□ 1.53
CLRN2A0PK11 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.61■■□□□ 1.53
CLRN2A0PK11 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CLRN2A0PK11 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CLRN2A0PK11 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.6■■□□□ 1.53
CLRN2A0PK11 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.6■■□□□ 1.53
CLRN2A0PK11 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLRN2A0PK11 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CLRN2A0PK11 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CLRN2A0PK11 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLRN2A0PK11 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CLRN2A0PK11 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLRN2A0PK11 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CLRN2A0PK11 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CLRN2A0PK11 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms