Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
A0A1W2PRF3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.98■□□□□ 0.31
A0A1W2PRF3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
A0A1W2PRF3 GPX1P1-201ENST00000388829 606 ntBASIC16.98■□□□□ 0.31
A0A1W2PRF3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.98■□□□□ 0.31
A0A1W2PRF3 AC245052.3-201ENST00000450182 901 ntBASIC16.98■□□□□ 0.31
A0A1W2PRF3 AC083906.2-201ENST00000511578 360 ntBASIC16.98■□□□□ 0.31
A0A1W2PRF3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
A0A1W2PRF3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.98■□□□□ 0.31
A0A1W2PRF3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.98■□□□□ 0.31
A0A1W2PRF3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.98■□□□□ 0.31
A0A1W2PRF3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.98■□□□□ 0.31
A0A1W2PRF3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
A0A1W2PRF3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
A0A1W2PRF3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
A0A1W2PRF3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 AC068338.2-201ENST00000563278 1430 ntBASIC16.97■□□□□ 0.31
A0A1W2PRF3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
A0A1W2PRF3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
A0A1W2PRF3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
A0A1W2PRF3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
A0A1W2PRF3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.97■□□□□ 0.31
A0A1W2PRF3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 CYP2T1P-201ENST00000432607 1285 ntBASIC16.97■□□□□ 0.31
A0A1W2PRF3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
A0A1W2PRF3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
A0A1W2PRF3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 AC105036.2-201ENST00000569468 176 ntBASIC16.97■□□□□ 0.31
A0A1W2PRF3 AL121832.2-201ENST00000610979 668 ntBASIC16.97■□□□□ 0.31
A0A1W2PRF3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
A0A1W2PRF3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
A0A1W2PRF3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
A0A1W2PRF3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
A0A1W2PRF3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
A0A1W2PRF3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
A0A1W2PRF3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
A0A1W2PRF3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
A0A1W2PRF3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
A0A1W2PRF3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
A0A1W2PRF3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
A0A1W2PRF3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
A0A1W2PRF3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
A0A1W2PRF3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
A0A1W2PRF3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
A0A1W2PRF3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
A0A1W2PRF3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.96■□□□□ 0.31
A0A1W2PRF3 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.96■□□□□ 0.31
A0A1W2PRF3 NCF1B-203ENST00000435988 1254 ntBASIC16.96■□□□□ 0.31
A0A1W2PRF3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.96■□□□□ 0.31
A0A1W2PRF3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.96■□□□□ 0.31
A0A1W2PRF3 AC104771.1-201ENST00000603335 964 ntBASIC16.96■□□□□ 0.31
A0A1W2PRF3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
A0A1W2PRF3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.96■□□□□ 0.31
A0A1W2PRF3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
A0A1W2PRF3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
A0A1W2PRF3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
A0A1W2PRF3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.96■□□□□ 0.31
A0A1W2PRF3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.96■□□□□ 0.3
A0A1W2PRF3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
A0A1W2PRF3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
A0A1W2PRF3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
A0A1W2PRF3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
A0A1W2PRF3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
A0A1W2PRF3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
A0A1W2PRF3 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.95■□□□□ 0.3
A0A1W2PRF3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
A0A1W2PRF3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
A0A1W2PRF3 AC244015.2-201ENST00000616358 1861 ntBASIC16.95■□□□□ 0.3
A0A1W2PRF3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
A0A1W2PRF3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
A0A1W2PRF3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
A0A1W2PRF3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
A0A1W2PRF3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.95■□□□□ 0.3
A0A1W2PRF3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.95■□□□□ 0.3
A0A1W2PRF3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
A0A1W2PRF3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
A0A1W2PRF3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
A0A1W2PRF3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
A0A1W2PRF3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.95■□□□□ 0.3
A0A1W2PRF3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
A0A1W2PRF3 AC016405.3-201ENST00000607710 860 ntBASIC16.95■□□□□ 0.3
A0A1W2PRF3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.95■□□□□ 0.3
A0A1W2PRF3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
A0A1W2PRF3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.95■□□□□ 0.3
A0A1W2PRF3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
A0A1W2PRF3 Z98882.1-201ENST00000622160 2253 ntBASIC16.95■□□□□ 0.3
A0A1W2PRF3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
A0A1W2PRF3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
A0A1W2PRF3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms