Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV4-1A0A0J9YWV2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV4-1A0A0J9YWV2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 AC011484.1-201ENST00000377652 1995 ntBASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 AC061975.6-201ENST00000579045 1553 ntBASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV4-1A0A0J9YWV2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 AC027682.1-201ENST00000562846 899 ntBASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 EEF1DP3-203ENST00000566025 782 ntBASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.95■□□□□ 0.62
TRBV4-1A0A0J9YWV2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV4-1A0A0J9YWV2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV4-1A0A0J9YWV2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRBV4-1A0A0J9YWV2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV4-1A0A0J9YWV2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV4-1A0A0J9YWV2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV4-1A0A0J9YWV2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV4-1A0A0J9YWV2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV4-1A0A0J9YWV2 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.94■□□□□ 0.62
TRBV4-1A0A0J9YWV2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRBV4-1A0A0J9YWV2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV4-1A0A0J9YWV2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.94■□□□□ 0.62
TRBV4-1A0A0J9YWV2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRBV4-1A0A0J9YWV2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.94■□□□□ 0.62
TRBV4-1A0A0J9YWV2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 AC007952.6-201ENST00000573168 2673 ntBASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 AC003957.1-201ENST00000625108 2673 ntBASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 AC053503.5-201ENST00000601508 636 ntBASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV4-1A0A0J9YWV2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 AP004607.4-201ENST00000530158 1459 ntBASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 MIR572-201ENST00000384983 95 ntBASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 AC096631.2-201ENST00000436136 790 ntBASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 PBX2P1-201ENST00000493219 1291 ntBASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 AP001330.3-201ENST00000520123 633 ntBASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRBV4-1A0A0J9YWV2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms