Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 AL138724.1-201ENST00000606771 1088 ntBASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SMUG1P1-201ENST00000590640 811 ntBASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 AC138932.1-201ENST00000534164 6830 ntBASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV8-1A0A0A6YYK1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 GUSBP5-201ENST00000418136 578 ntBASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 AC011298.3-201ENST00000615796 283 ntBASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 AL035685.1-201ENST00000636663 812 ntBASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 AC087289.5-201ENST00000586076 3175 ntBASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-1A0A0A6YYK1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms