Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 AC105265.2-201ENST00000467189 838 ntBASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 AC005837.3-201ENST00000612163 286 ntBASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 FP700111.2-201ENST00000619190 1892 ntBASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV27A0A087WT01 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 KRT87P-202ENST00000534226 1464 ntBASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 AL391422.3-201ENST00000603791 2761 ntBASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRAV27A0A087WT01 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 IRS3P-201ENST00000223076 1006 ntBASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV27A0A087WT01 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 AC008175.2-201ENST00000612840 297 ntBASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV27A0A087WT01 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV27A0A087WT01 PCDHAC2-203ENST00000615316 3011 ntBASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 AC011484.1-201ENST00000377652 1995 ntBASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV27A0A087WT01 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms