Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 ZEB2-224ENST00000539609 4061 ntTSL 2 BASIC10.3□□□□□ -0.76
SYCE2Q6PIF2 GCNT1-201ENST00000376730 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYCE2Q6PIF2 C12orf40-201ENST00000324616 2776 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYCE2Q6PIF2 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC10.3□□□□□ -0.76
SYCE2Q6PIF2 GINS3-201ENST00000318129 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SYCE2Q6PIF2 CCT7P2-201ENST00000479109 1454 ntBASIC10.3□□□□□ -0.76
SYCE2Q6PIF2 ATP1A3-207ENST00000543770 3427 ntTSL 2 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 PCSK2-201ENST00000262545 4740 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 ATG16L1-205ENST00000392020 3213 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 TCEANC2-202ENST00000371331 936 ntTSL 2 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 APTX-204ENST00000379817 2106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 IGLV2-18-201ENST00000390310 367 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 PRH2-202ENST00000396400 673 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 MIR885-201ENST00000401316 74 ntBASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 MRPL48-204ENST00000411840 1197 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 AC004448.3-201ENST00000435953 543 ntTSL 2 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 AL389889.1-201ENST00000443747 566 ntTSL 4 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 AC007163.2-201ENST00000479041 750 ntTSL 4 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 OR10J7P-201ENST00000503933 934 ntBASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 FAM197Y9-203ENST00000505707 345 ntBASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 APOBEC3B-AS1-201ENST00000513758 691 ntTSL 3 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 MSRA-205ENST00000518255 674 ntTSL 5 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 IGHV3-75-201ENST00000523951 358 ntBASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 ILF2P2-201ENST00000547482 1117 ntBASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 AC055716.3-201ENST00000547533 761 ntTSL 3 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 AL157912.1-201ENST00000554245 548 ntTSL 4 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 ZMYND19P1-201ENST00000554267 787 ntBASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 AC007907.1-201ENST00000557953 451 ntTSL 3 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 DPPA5P2-201ENST00000561451 299 ntBASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 AC034105.5-201ENST00000564017 314 ntBASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 AC104564.6-201ENST00000582881 1052 ntBASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 G6PC-204ENST00000592383 987 ntTSL 2 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 Metazoa_SRP.159-201ENST00000612585 265 ntBASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 FAM197Y4-201ENST00000616275 467 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 AL354718.2-201ENST00000618030 371 ntTSL 2 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 FAM197Y5-203ENST00000619815 467 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 Metazoa_SRP.54-201ENST00000620533 282 ntBASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 AC004678.2-201ENST00000623695 1002 ntBASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 LINC00506-204ENST00000630120 587 ntTSL 4 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 UHRF1-205ENST00000620565 3965 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 HFE-207ENST00000357618 5286 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 ATG13-207ENST00000526508 4199 ntTSL 5 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 MTFR1L-204ENST00000374307 1868 ntTSL 2 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 SCNN1B-208ENST00000568923 1852 ntTSL 3 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 ZNF561-202ENST00000326044 2017 ntTSL 2 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 NUMB-202ENST00000356296 3453 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 FAM157C-204ENST00000570230 2184 ntTSL 5 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 AC024257.3-201ENST00000595310 3645 ntBASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 SASH1-204ENST00000622663 5075 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 LINC01588-208ENST00000554129 2301 ntTSL 2 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 ZNF160-201ENST00000355147 1304 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 ATF2-207ENST00000409833 1335 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 PYHIN1-205ENST00000392254 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 NLRC5-201ENST00000262510 6822 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 SCAF8-202ENST00000367186 4908 ntTSL 2 BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 RAB6B-207ENST00000543906 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SYCE2Q6PIF2 ITIH6-201ENST00000218436 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 C14orf132-203ENST00000555004 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 GTF2B-201ENST00000370500 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 MRPL47-203ENST00000476781 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 NDST2-201ENST00000299641 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 MAPK8-207ENST00000395611 5844 ntAPPRIS ALT1 TSL 2 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 LINC01163-202ENST00000630252 3086 ntTSL 2 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AC116913.1-201ENST00000565387 2168 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 HMGB3-201ENST00000325307 3560 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 RNF43-207ENST00000583753 3560 ntTSL 2 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 CACNB4-202ENST00000360283 1885 ntTSL 5 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 POC5-203ENST00000446329 1728 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 RPL23-206ENST00000479035 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 ARHGEF9-233ENST00000637520 5682 ntTSL 5 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 PPM1K-210ENST00000608933 6484 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 RGPD5-201ENST00000016946 7253 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 DCLRE1C-201ENST00000357717 2228 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 SERPINA5-205ENST00000554276 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 SUMO2-201ENST00000314523 809 ntTSL 2 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AL365214.1-201ENST00000404237 997 ntBASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AC008060.3-201ENST00000419225 534 ntTSL 4 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AC011998.2-201ENST00000430884 473 ntBASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AC112907.1-201ENST00000434957 540 ntTSL 4 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 CICP18-202ENST00000436899 727 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 KCNMB2-AS1-204ENST00000437488 964 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 LINC01738-201ENST00000454285 815 ntTSL 3 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AC093270.1-201ENST00000482584 486 ntBASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AP002784.1-201ENST00000506309 546 ntTSL 4 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AC093835.1-201ENST00000508072 568 ntTSL 4 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AC025437.6-201ENST00000518624 935 ntBASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 IGLVV-58-201ENST00000520445 304 ntBASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 SDHD-203ENST00000526592 861 ntTSL 3 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 KCTD21-AS1-205ENST00000530261 910 ntTSL 4 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 ACAP1-209ENST00000575415 317 ntTSL 2 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AP005265.1-201ENST00000584914 872 ntBASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AC013290.1-201ENST00000586960 537 ntBASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 ZFP14-202ENST00000589280 642 ntTSL 3 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 TEX26-AS1-217ENST00000593246 797 ntTSL 5 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 AC020908.3-201ENST00000597045 610 ntTSL 3 BASIC10.28□□□□□ -0.76
SYCE2Q6PIF2 TEX101-201ENST00000598265 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms