Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLIC4Q9Y696 AC011484.1-201ENST00000377652 1995 ntBASIC23.67■■□□□ 1.38
CLIC4Q9Y696 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 FP700111.2-201ENST00000619190 1892 ntBASIC23.66■■□□□ 1.38
CLIC4Q9Y696 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 AC010141.2-201ENST00000452426 721 ntBASIC23.66■■□□□ 1.38
CLIC4Q9Y696 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 SLC7A5P2-201ENST00000553010 536 ntBASIC23.66■■□□□ 1.38
CLIC4Q9Y696 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLIC4Q9Y696 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 YBX1P1-201ENST00000445822 960 ntBASIC23.65■■□□□ 1.38
CLIC4Q9Y696 CCDC92B-201ENST00000575506 885 ntBASIC23.65■■□□□ 1.38
CLIC4Q9Y696 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.65■■□□□ 1.38
CLIC4Q9Y696 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CLIC4Q9Y696 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CLIC4Q9Y696 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.64■■□□□ 1.38
CLIC4Q9Y696 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.64■■□□□ 1.37
CLIC4Q9Y696 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CLIC4Q9Y696 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLIC4Q9Y696 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CLIC4Q9Y696 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.64■■□□□ 1.37
CLIC4Q9Y696 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.64■■□□□ 1.37
CLIC4Q9Y696 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.64■■□□□ 1.37
CLIC4Q9Y696 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLIC4Q9Y696 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CLIC4Q9Y696 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.64■■□□□ 1.37
CLIC4Q9Y696 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CLIC4Q9Y696 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CLIC4Q9Y696 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.63■■□□□ 1.37
CLIC4Q9Y696 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.63■■□□□ 1.37
CLIC4Q9Y696 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.63■■□□□ 1.37
CLIC4Q9Y696 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLIC4Q9Y696 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.63■■□□□ 1.37
CLIC4Q9Y696 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CLIC4Q9Y696 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.63■■□□□ 1.37
CLIC4Q9Y696 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CLIC4Q9Y696 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.63■■□□□ 1.37
CLIC4Q9Y696 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.63■■□□□ 1.37
CLIC4Q9Y696 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLIC4Q9Y696 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CLIC4Q9Y696 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 AP001160.3-201ENST00000601484 763 ntBASIC23.62■■□□□ 1.37
CLIC4Q9Y696 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLIC4Q9Y696 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms