Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 TSPY20P-201ENST00000450910 630 ntBASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHGA6Q9Y5G7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA6Q9Y5G7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 CYP2T1P-201ENST00000432607 1285 ntBASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 MIR4758-201ENST00000577688 71 ntBASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 AC120498.10-201ENST00000621827 505 ntBASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 OR10C1-204ENST00000622521 1039 ntBASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA6Q9Y5G7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 AC008175.2-201ENST00000612840 297 ntBASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PCDHGA6Q9Y5G7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
PCDHGA6Q9Y5G7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 POU5F1P4-201ENST00000413175 1085 ntBASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 AL512625.2-201ENST00000417533 625 ntBASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA6Q9Y5G7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms