Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHGA9Q9Y5G4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA9Q9Y5G4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA9Q9Y5G4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA9Q9Y5G4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA9Q9Y5G4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHGA9Q9Y5G4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PCDHGA9Q9Y5G4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA9Q9Y5G4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHGA9Q9Y5G4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHGA9Q9Y5G4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHGA9Q9Y5G4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHGA9Q9Y5G4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 RNF165-205ENST00000588679 2904 ntBASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 AC006058.3-201ENST00000606217 1069 ntBASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHGA9Q9Y5G4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCDHGA9Q9Y5G4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDHGA9Q9Y5G4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 AC128676.1-201ENST00000454392 318 ntBASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 AC026366.1-201ENST00000488803 879 ntBASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 UNC93B5-201ENST00000530315 699 ntBASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 AC142381.4-202ENST00000563973 229 ntBASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PCDHGA9Q9Y5G4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA9Q9Y5G4 FBXW4P1-201ENST00000426721 2239 ntBASIC19.33■□□□□ 0.69
PCDHGA9Q9Y5G4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA9Q9Y5G4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDHGA9Q9Y5G4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms