Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 AC008687.6-201ENST00000596318 630 ntBASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHB9Q9Y5E1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB9Q9Y5E1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHB9Q9Y5E1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDHB9Q9Y5E1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PCDHB9Q9Y5E1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PCDHB9Q9Y5E1 POU5F1P3-201ENST00000428824 1078 ntBASIC21.06■□□□□ 0.96
PCDHB9Q9Y5E1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB9Q9Y5E1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB9Q9Y5E1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.06■□□□□ 0.96
PCDHB9Q9Y5E1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB9Q9Y5E1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHB9Q9Y5E1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHB9Q9Y5E1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
PCDHB9Q9Y5E1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
PCDHB9Q9Y5E1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 MIR4758-201ENST00000577688 71 ntBASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 AC010536.3-201ENST00000620306 533 ntBASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHB9Q9Y5E1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 RNA5SP413-201ENST00000516373 109 ntBASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 AC133552.2-202ENST00000575694 574 ntBASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 ITM2C-210ENST00000620962 501 ntBASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHB9Q9Y5E1 AC026310.3-201ENST00000625186 2373 ntBASIC21.03■□□□□ 0.96
PCDHB9Q9Y5E1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PCDHB9Q9Y5E1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB9Q9Y5E1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB9Q9Y5E1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB9Q9Y5E1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB9Q9Y5E1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDHB9Q9Y5E1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDHB9Q9Y5E1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDHB9Q9Y5E1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.03■□□□□ 0.96
PCDHB9Q9Y5E1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDHB9Q9Y5E1 AL024507.2-201ENST00000606070 2574 ntBASIC21.03■□□□□ 0.96
PCDHB9Q9Y5E1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.03■□□□□ 0.96
PCDHB9Q9Y5E1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB9Q9Y5E1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHB9Q9Y5E1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.02■□□□□ 0.96
PCDHB9Q9Y5E1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB9Q9Y5E1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PCDHB9Q9Y5E1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB9Q9Y5E1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDHB9Q9Y5E1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDHB9Q9Y5E1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB9Q9Y5E1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB9Q9Y5E1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB9Q9Y5E1 RBM17P2-201ENST00000616397 1405 ntBASIC21.02■□□□□ 0.96
PCDHB9Q9Y5E1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDHB9Q9Y5E1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PCDHB9Q9Y5E1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.02■□□□□ 0.95
PCDHB9Q9Y5E1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHB9Q9Y5E1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDHB9Q9Y5E1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.01■□□□□ 0.95
PCDHB9Q9Y5E1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDHB9Q9Y5E1 TERF1P5-201ENST00000477545 1207 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms