Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
YIPF1Q9Y548 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
YIPF1Q9Y548 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
YIPF1Q9Y548 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.75■■□□□ 1.07
YIPF1Q9Y548 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
YIPF1Q9Y548 AC116050.2-201ENST00000612102 1779 ntBASIC21.75■■□□□ 1.07
YIPF1Q9Y548 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
YIPF1Q9Y548 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.75■■□□□ 1.07
YIPF1Q9Y548 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
YIPF1Q9Y548 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
YIPF1Q9Y548 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
YIPF1Q9Y548 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
YIPF1Q9Y548 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
YIPF1Q9Y548 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
YIPF1Q9Y548 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.75■■□□□ 1.07
YIPF1Q9Y548 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
YIPF1Q9Y548 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
YIPF1Q9Y548 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
YIPF1Q9Y548 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
YIPF1Q9Y548 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.74■■□□□ 1.07
YIPF1Q9Y548 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
YIPF1Q9Y548 AC006058.3-201ENST00000606217 1069 ntBASIC21.74■■□□□ 1.07
YIPF1Q9Y548 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
YIPF1Q9Y548 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
YIPF1Q9Y548 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
YIPF1Q9Y548 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.74■■□□□ 1.07
YIPF1Q9Y548 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
YIPF1Q9Y548 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
YIPF1Q9Y548 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 AC098590.1-201ENST00000468126 897 ntBASIC21.73■■□□□ 1.07
YIPF1Q9Y548 AC026366.1-201ENST00000488803 879 ntBASIC21.73■■□□□ 1.07
YIPF1Q9Y548 AP003097.1-201ENST00000530657 1135 ntBASIC21.73■■□□□ 1.07
YIPF1Q9Y548 AC060766.5-201ENST00000590539 871 ntBASIC21.73■■□□□ 1.07
YIPF1Q9Y548 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
YIPF1Q9Y548 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 HLA-B-256ENST00000639848 1089 ntBASIC21.72■■□□□ 1.07
YIPF1Q9Y548 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
YIPF1Q9Y548 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 AC128676.1-201ENST00000454392 318 ntBASIC21.71■■□□□ 1.07
YIPF1Q9Y548 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 AC105020.6-201ENST00000621523 1217 ntBASIC21.71■■□□□ 1.07
YIPF1Q9Y548 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.71■■□□□ 1.07
YIPF1Q9Y548 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
YIPF1Q9Y548 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.7■■□□□ 1.06
YIPF1Q9Y548 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms