Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 AL355075.4-201ENST00000554988 638 ntBASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 AC120498.8-201ENST00000614275 531 ntBASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIT1Q9Y3P8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 TMPOP1-202ENST00000424642 1267 ntBASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 PRKY-204ENST00000533551 1019 ntBASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 C2orf69P4-201ENST00000565394 541 ntBASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 C11orf96-202ENST00000528572 1834 ntBASIC20.97■□□□□ 0.95
SIT1Q9Y3P8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 KRASP1-201ENST00000407852 552 ntBASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 CD177P1-201ENST00000606252 935 ntBASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIT1Q9Y3P8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 RARRES2P10-201ENST00000564312 460 ntBASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIT1Q9Y3P8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 ARMC10P1-201ENST00000313754 855 ntBASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIT1Q9Y3P8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms