Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.66■□□□□ 0.58
RCE1Q9Y256 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCE1Q9Y256 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.66■□□□□ 0.58
RCE1Q9Y256 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.66■□□□□ 0.58
RCE1Q9Y256 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.66■□□□□ 0.58
RCE1Q9Y256 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.66■□□□□ 0.58
RCE1Q9Y256 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RCE1Q9Y256 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RCE1Q9Y256 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.66■□□□□ 0.58
RCE1Q9Y256 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RCE1Q9Y256 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCE1Q9Y256 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCE1Q9Y256 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCE1Q9Y256 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.66■□□□□ 0.58
RCE1Q9Y256 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RCE1Q9Y256 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RCE1Q9Y256 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RCE1Q9Y256 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RCE1Q9Y256 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RCE1Q9Y256 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
RCE1Q9Y256 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.65■□□□□ 0.58
RCE1Q9Y256 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.65■□□□□ 0.58
RCE1Q9Y256 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.65■□□□□ 0.58
RCE1Q9Y256 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 AP001160.3-201ENST00000601484 763 ntBASIC18.65■□□□□ 0.58
RCE1Q9Y256 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RCE1Q9Y256 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 AF106564.1-201ENST00000607058 2553 ntBASIC18.65■□□□□ 0.58
RCE1Q9Y256 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RCE1Q9Y256 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCE1Q9Y256 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RCE1Q9Y256 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RCE1Q9Y256 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
RCE1Q9Y256 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RCE1Q9Y256 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCE1Q9Y256 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCE1Q9Y256 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.64■□□□□ 0.57
RCE1Q9Y256 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RCE1Q9Y256 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.64■□□□□ 0.57
RCE1Q9Y256 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCE1Q9Y256 MIR935-201ENST00000401179 91 ntBASIC18.64■□□□□ 0.57
RCE1Q9Y256 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RCE1Q9Y256 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.64■□□□□ 0.57
RCE1Q9Y256 KRT18P20-201ENST00000548986 1279 ntBASIC18.64■□□□□ 0.57
RCE1Q9Y256 KRT18P61-201ENST00000585825 1298 ntBASIC18.64■□□□□ 0.57
RCE1Q9Y256 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.64■□□□□ 0.57
RCE1Q9Y256 AC120498.10-201ENST00000621827 505 ntBASIC18.64■□□□□ 0.57
RCE1Q9Y256 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RCE1Q9Y256 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCE1Q9Y256 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
RCE1Q9Y256 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RCE1Q9Y256 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCE1Q9Y256 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCE1Q9Y256 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCE1Q9Y256 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCE1Q9Y256 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCE1Q9Y256 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCE1Q9Y256 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RCE1Q9Y256 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RCE1Q9Y256 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCE1Q9Y256 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCE1Q9Y256 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
RCE1Q9Y256 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
RCE1Q9Y256 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.63■□□□□ 0.57
RCE1Q9Y256 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RCE1Q9Y256 KRT18P5-201ENST00000436075 1291 ntBASIC18.63■□□□□ 0.57
RCE1Q9Y256 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RCE1Q9Y256 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.63■□□□□ 0.57
RCE1Q9Y256 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RCE1Q9Y256 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RCE1Q9Y256 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCE1Q9Y256 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RCE1Q9Y256 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.63■□□□□ 0.57
RCE1Q9Y256 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.63■□□□□ 0.57
RCE1Q9Y256 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCE1Q9Y256 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCE1Q9Y256 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RCE1Q9Y256 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.62■□□□□ 0.57
RCE1Q9Y256 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCE1Q9Y256 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.62■□□□□ 0.57
RCE1Q9Y256 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
RCE1Q9Y256 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RCE1Q9Y256 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCE1Q9Y256 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCE1Q9Y256 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms