Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDE1Q9NXR1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.03■□□□□ 0.8
NDE1Q9NXR1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NDE1Q9NXR1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NDE1Q9NXR1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NDE1Q9NXR1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.03■□□□□ 0.8
NDE1Q9NXR1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.03■□□□□ 0.8
NDE1Q9NXR1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDE1Q9NXR1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.03■□□□□ 0.8
NDE1Q9NXR1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDE1Q9NXR1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDE1Q9NXR1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.03■□□□□ 0.8
NDE1Q9NXR1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.03■□□□□ 0.8
NDE1Q9NXR1 BX323043.1-201ENST00000641006 1765 ntBASIC20.03■□□□□ 0.8
NDE1Q9NXR1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NDE1Q9NXR1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NDE1Q9NXR1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.02■□□□□ 0.8
NDE1Q9NXR1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDE1Q9NXR1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NDE1Q9NXR1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDE1Q9NXR1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NDE1Q9NXR1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDE1Q9NXR1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.02■□□□□ 0.8
NDE1Q9NXR1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
NDE1Q9NXR1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDE1Q9NXR1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDE1Q9NXR1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDE1Q9NXR1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDE1Q9NXR1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NDE1Q9NXR1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
NDE1Q9NXR1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NDE1Q9NXR1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NDE1Q9NXR1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.02■□□□□ 0.79
NDE1Q9NXR1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
NDE1Q9NXR1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.02■□□□□ 0.79
NDE1Q9NXR1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
NDE1Q9NXR1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 KRT125P-201ENST00000546827 989 ntBASIC20.01■□□□□ 0.79
NDE1Q9NXR1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NDE1Q9NXR1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NDE1Q9NXR1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20■□□□□ 0.79
NDE1Q9NXR1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20■□□□□ 0.79
NDE1Q9NXR1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20■□□□□ 0.79
NDE1Q9NXR1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDE1Q9NXR1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDE1Q9NXR1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDE1Q9NXR1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NDE1Q9NXR1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDE1Q9NXR1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDE1Q9NXR1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NDE1Q9NXR1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NDE1Q9NXR1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NDE1Q9NXR1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NDE1Q9NXR1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NDE1Q9NXR1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20■□□□□ 0.79
NDE1Q9NXR1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.99■□□□□ 0.79
NDE1Q9NXR1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDE1Q9NXR1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDE1Q9NXR1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDE1Q9NXR1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NDE1Q9NXR1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NDE1Q9NXR1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NDE1Q9NXR1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NDE1Q9NXR1 AC010997.5-201ENST00000609182 354 ntBASIC19.98■□□□□ 0.79
NDE1Q9NXR1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDE1Q9NXR1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.98■□□□□ 0.79
NDE1Q9NXR1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NDE1Q9NXR1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms