Protein–RNA interactions for Protein: Q9NQ36

SCUBE2, Signal peptide, CUB and EGF-like domain-containing protein 2, humanhuman

Predictions only

Length 999 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2Q9NQ36 AC245052.3-201ENST00000450182 901 ntBASIC21.14■□□□□ 0.97
SCUBE2Q9NQ36 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.14■□□□□ 0.97
SCUBE2Q9NQ36 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCUBE2Q9NQ36 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCUBE2Q9NQ36 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCUBE2Q9NQ36 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCUBE2Q9NQ36 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SCUBE2Q9NQ36 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCUBE2Q9NQ36 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 GPX1P1-201ENST00000388829 606 ntBASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 MFSD11-216ENST00000590393 1141 ntBASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 AC011767.1-201ENST00000617410 1153 ntBASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCUBE2Q9NQ36 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCUBE2Q9NQ36 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.12■□□□□ 0.97
SCUBE2Q9NQ36 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SCUBE2Q9NQ36 FEM1AP4-201ENST00000443167 1987 ntBASIC21.12■□□□□ 0.97
SCUBE2Q9NQ36 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCUBE2Q9NQ36 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCUBE2Q9NQ36 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCUBE2Q9NQ36 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCUBE2Q9NQ36 Z99916.3-201ENST00000623422 1080 ntBASIC21.12■□□□□ 0.97
SCUBE2Q9NQ36 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SCUBE2Q9NQ36 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.12■□□□□ 0.97
SCUBE2Q9NQ36 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 AC142086.2-201ENST00000569753 217 ntBASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 AC010536.3-201ENST00000620306 533 ntBASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SCUBE2Q9NQ36 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 AC093827.2-201ENST00000512654 315 ntBASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SCUBE2Q9NQ36 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 RBM17P2-201ENST00000616397 1405 ntBASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 AC007375.3-201ENST00000600936 2314 ntBASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCUBE2Q9NQ36 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SCUBE2Q9NQ36 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCUBE2Q9NQ36 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCUBE2Q9NQ36 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCUBE2Q9NQ36 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCUBE2Q9NQ36 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.08■□□□□ 0.97
SCUBE2Q9NQ36 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SCUBE2Q9NQ36 TERF1P5-201ENST00000477545 1207 ntBASIC21.08■□□□□ 0.97
SCUBE2Q9NQ36 KRT18P6-201ENST00000555540 1265 ntBASIC21.08■□□□□ 0.97
SCUBE2Q9NQ36 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
SCUBE2Q9NQ36 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.08■□□□□ 0.97
SCUBE2Q9NQ36 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SCUBE2Q9NQ36 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms